Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SRP9P49458 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRP9P49458 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRP9P49458 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRP9P49458 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRP9P49458 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.75■□□□□ 0.43
SRP9P49458 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
SRP9P49458 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRP9P49458 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SRP9P49458 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRP9P49458 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRP9P49458 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SRP9P49458 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.75■□□□□ 0.43
SRP9P49458 AC006015.1-201ENST00000429970 570 ntBASIC17.75■□□□□ 0.43
SRP9P49458 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.75■□□□□ 0.43
SRP9P49458 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SRP9P49458 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.75■□□□□ 0.43
SRP9P49458 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.75■□□□□ 0.43
SRP9P49458 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.75■□□□□ 0.43
SRP9P49458 TNXA-203ENST00000507684 2038 ntBASIC17.75■□□□□ 0.43
SRP9P49458 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SRP9P49458 AL158211.5-201ENST00000623583 2518 ntBASIC17.75■□□□□ 0.43
SRP9P49458 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.75■□□□□ 0.43
SRP9P49458 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRP9P49458 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRP9P49458 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.75■□□□□ 0.43
SRP9P49458 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRP9P49458 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.75■□□□□ 0.43
SRP9P49458 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRP9P49458 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SRP9P49458 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
SRP9P49458 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRP9P49458 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SRP9P49458 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SRP9P49458 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.74■□□□□ 0.43
SRP9P49458 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRP9P49458 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SRP9P49458 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SRP9P49458 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRP9P49458 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRP9P49458 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRP9P49458 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.74■□□□□ 0.43
SRP9P49458 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.74■□□□□ 0.43
SRP9P49458 AC245052.3-201ENST00000450182 901 ntBASIC17.74■□□□□ 0.43
SRP9P49458 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
SRP9P49458 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.74■□□□□ 0.43
SRP9P49458 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.74■□□□□ 0.43
SRP9P49458 BID-214ENST00000617586 542 ntTSL 5 BASIC17.74■□□□□ 0.43
SRP9P49458 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRP9P49458 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRP9P49458 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SRP9P49458 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SRP9P49458 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SRP9P49458 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.73■□□□□ 0.43
SRP9P49458 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.73■□□□□ 0.43
SRP9P49458 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.73■□□□□ 0.43
SRP9P49458 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SRP9P49458 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.73■□□□□ 0.43
SRP9P49458 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.73■□□□□ 0.43
SRP9P49458 TCF3P1-201ENST00000423021 1937 ntBASIC17.73■□□□□ 0.43
SRP9P49458 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SRP9P49458 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.73■□□□□ 0.43
SRP9P49458 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.73■□□□□ 0.43
SRP9P49458 AC092666.2-201ENST00000613287 246 ntBASIC17.73■□□□□ 0.43
SRP9P49458 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.73■□□□□ 0.43
SRP9P49458 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRP9P49458 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.73■□□□□ 0.43
SRP9P49458 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SRP9P49458 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.73■□□□□ 0.43
SRP9P49458 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.72■□□□□ 0.43
SRP9P49458 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.72■□□□□ 0.43
SRP9P49458 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.72■□□□□ 0.43
SRP9P49458 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 AC125437.2-201ENST00000625180 2167 ntBASIC17.72■□□□□ 0.43
SRP9P49458 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.72■□□□□ 0.43
SRP9P49458 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms