Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
KRT20P35900 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
KRT20P35900 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
KRT20P35900 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
KRT20P35900 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT20P35900 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT20P35900 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT20P35900 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT20P35900 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT20P35900 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT20P35900 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
KRT20P35900 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT20P35900 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT20P35900 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
KRT20P35900 AC026185.1-201ENST00000445748 174 ntBASIC19.02■□□□□ 0.64
KRT20P35900 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.02■□□□□ 0.64
KRT20P35900 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT20P35900 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT20P35900 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.02■□□□□ 0.64
KRT20P35900 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT20P35900 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.02■□□□□ 0.64
KRT20P35900 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT20P35900 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT20P35900 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRT20P35900 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
KRT20P35900 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
KRT20P35900 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.02■□□□□ 0.63
KRT20P35900 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRT20P35900 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
KRT20P35900 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT20P35900 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
KRT20P35900 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT20P35900 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT20P35900 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT20P35900 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
KRT20P35900 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT20P35900 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
KRT20P35900 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT20P35900 CNN2P6-201ENST00000439038 900 ntBASIC19.01■□□□□ 0.63
KRT20P35900 AC005181.1-201ENST00000604782 1256 ntBASIC19.01■□□□□ 0.63
KRT20P35900 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT20P35900 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.01■□□□□ 0.63
KRT20P35900 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT20P35900 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
KRT20P35900 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
KRT20P35900 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19■□□□□ 0.63
KRT20P35900 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19■□□□□ 0.63
KRT20P35900 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19■□□□□ 0.63
KRT20P35900 SAPCD2P1-201ENST00000395413 1184 ntBASIC19■□□□□ 0.63
KRT20P35900 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 UQCRFS1P1-201ENST00000435169 820 ntBASIC19■□□□□ 0.63
KRT20P35900 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
KRT20P35900 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19■□□□□ 0.63
KRT20P35900 FAM21FP-204ENST00000608637 956 ntBASIC19■□□□□ 0.63
KRT20P35900 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19■□□□□ 0.63
KRT20P35900 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19■□□□□ 0.63
KRT20P35900 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
KRT20P35900 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19■□□□□ 0.63
KRT20P35900 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
KRT20P35900 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
KRT20P35900 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT20P35900 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT20P35900 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT20P35900 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT20P35900 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT20P35900 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT20P35900 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT20P35900 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.99■□□□□ 0.63
KRT20P35900 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.99■□□□□ 0.63
KRT20P35900 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT20P35900 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT20P35900 AC068338.2-201ENST00000563278 1430 ntBASIC18.99■□□□□ 0.63
KRT20P35900 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT20P35900 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT20P35900 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT20P35900 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT20P35900 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT20P35900 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT20P35900 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT20P35900 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms