Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
RFC4P35249 AC010203.1-204ENST00000548782 407 ntBASIC25.38■■□□□ 1.65
RFC4P35249 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
RFC4P35249 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
RFC4P35249 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.38■■□□□ 1.65
RFC4P35249 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
RFC4P35249 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.38■■□□□ 1.65
RFC4P35249 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RFC4P35249 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RFC4P35249 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RFC4P35249 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RFC4P35249 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.37■■□□□ 1.65
RFC4P35249 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
RFC4P35249 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RFC4P35249 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
RFC4P35249 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RFC4P35249 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.37■■□□□ 1.65
RFC4P35249 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RFC4P35249 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RFC4P35249 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.37■■□□□ 1.65
RFC4P35249 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.37■■□□□ 1.65
RFC4P35249 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RFC4P35249 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RFC4P35249 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RFC4P35249 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.36■■□□□ 1.65
RFC4P35249 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RFC4P35249 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.36■■□□□ 1.65
RFC4P35249 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC25.36■■□□□ 1.65
RFC4P35249 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC25.36■■□□□ 1.65
RFC4P35249 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RFC4P35249 LIN28AP1-201ENST00000429574 405 ntBASIC25.36■■□□□ 1.65
RFC4P35249 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
RFC4P35249 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.36■■□□□ 1.65
RFC4P35249 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.36■■□□□ 1.65
RFC4P35249 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RFC4P35249 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RFC4P35249 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.36■■□□□ 1.65
RFC4P35249 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
RFC4P35249 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.35■■□□□ 1.65
RFC4P35249 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RFC4P35249 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RFC4P35249 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.35■■□□□ 1.65
RFC4P35249 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.35■■□□□ 1.65
RFC4P35249 WWOX-216ENST00000569818 525 ntBASIC25.35■■□□□ 1.65
RFC4P35249 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
RFC4P35249 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC25.35■■□□□ 1.65
RFC4P35249 AL031985.4-201ENST00000642138 673 ntBASIC25.35■■□□□ 1.65
RFC4P35249 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.35■■□□□ 1.65
RFC4P35249 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RFC4P35249 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
RFC4P35249 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFC4P35249 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFC4P35249 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFC4P35249 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFC4P35249 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFC4P35249 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFC4P35249 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
RFC4P35249 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC25.34■■□□□ 1.65
RFC4P35249 ATP5G1P1-201ENST00000448724 379 ntBASIC25.34■■□□□ 1.65
RFC4P35249 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.34■■□□□ 1.65
RFC4P35249 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC25.34■■□□□ 1.65
RFC4P35249 GRAMD4P8-201ENST00000605465 1115 ntBASIC25.34■■□□□ 1.65
RFC4P35249 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.34■■□□□ 1.65
RFC4P35249 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.33■■□□□ 1.65
RFC4P35249 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.33■■□□□ 1.65
RFC4P35249 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RFC4P35249 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.33■■□□□ 1.65
RFC4P35249 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.33■■□□□ 1.65
RFC4P35249 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RFC4P35249 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RFC4P35249 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RFC4P35249 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC25.33■■□□□ 1.65
RFC4P35249 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC25.33■■□□□ 1.65
RFC4P35249 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RFC4P35249 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RFC4P35249 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.33■■□□□ 1.65
RFC4P35249 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.33■■□□□ 1.65
RFC4P35249 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
RFC4P35249 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
RFC4P35249 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
RFC4P35249 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RFC4P35249 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RFC4P35249 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC25.32■■□□□ 1.64
RFC4P35249 C2orf69P3-201ENST00000565542 1120 ntBASIC25.32■■□□□ 1.64
RFC4P35249 GUSBP5-202ENST00000510805 1989 ntBASIC25.32■■□□□ 1.64
RFC4P35249 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RFC4P35249 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RFC4P35249 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RFC4P35249 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
RFC4P35249 PTBP1P-201ENST00000554374 1601 ntBASIC25.31■■□□□ 1.64
RFC4P35249 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RFC4P35249 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RFC4P35249 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
RFC4P35249 AC006011.2-201ENST00000621313 1158 ntBASIC25.31■■□□□ 1.64
RFC4P35249 FSCN1P1-201ENST00000568912 1481 ntBASIC25.31■■□□□ 1.64
RFC4P35249 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RFC4P35249 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RFC4P35249 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RFC4P35249 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RFC4P35249 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms