Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCKBRP32239 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCKBRP32239 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCKBRP32239 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.32■□□□□ 0.68
CCKBRP32239 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.32■□□□□ 0.68
CCKBRP32239 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.32■□□□□ 0.68
CCKBRP32239 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCKBRP32239 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.32■□□□□ 0.68
CCKBRP32239 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCKBRP32239 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.32■□□□□ 0.68
CCKBRP32239 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCKBRP32239 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCKBRP32239 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCKBRP32239 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCKBRP32239 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCKBRP32239 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCKBRP32239 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCKBRP32239 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.31■□□□□ 0.68
CCKBRP32239 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.31■□□□□ 0.68
CCKBRP32239 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCKBRP32239 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCKBRP32239 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.31■□□□□ 0.68
CCKBRP32239 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCKBRP32239 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.31■□□□□ 0.68
CCKBRP32239 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCKBRP32239 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCKBRP32239 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.31■□□□□ 0.68
CCKBRP32239 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCKBRP32239 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.31■□□□□ 0.68
CCKBRP32239 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.31■□□□□ 0.68
CCKBRP32239 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCKBRP32239 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.3■□□□□ 0.68
CCKBRP32239 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.3■□□□□ 0.68
CCKBRP32239 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCKBRP32239 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.3■□□□□ 0.68
CCKBRP32239 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCKBRP32239 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCKBRP32239 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCKBRP32239 AC027702.1-201ENST00000563810 1770 ntBASIC19.3■□□□□ 0.68
CCKBRP32239 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.3■□□□□ 0.68
CCKBRP32239 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.3■□□□□ 0.68
CCKBRP32239 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.3■□□□□ 0.68
CCKBRP32239 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCKBRP32239 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCKBRP32239 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCKBRP32239 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCKBRP32239 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCKBRP32239 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCKBRP32239 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
CCKBRP32239 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.29■□□□□ 0.68
CCKBRP32239 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.29■□□□□ 0.68
CCKBRP32239 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCKBRP32239 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCKBRP32239 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCKBRP32239 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.29■□□□□ 0.68
CCKBRP32239 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCKBRP32239 KRT8P36-201ENST00000489121 1440 ntBASIC19.29■□□□□ 0.68
CCKBRP32239 MIR1224-201ENST00000408193 85 ntBASIC19.29■□□□□ 0.68
CCKBRP32239 AC087499.1-201ENST00000418141 1075 ntBASIC19.29■□□□□ 0.68
CCKBRP32239 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.29■□□□□ 0.68
CCKBRP32239 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CCKBRP32239 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCKBRP32239 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.29■□□□□ 0.68
CCKBRP32239 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.29■□□□□ 0.68
CCKBRP32239 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCKBRP32239 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCKBRP32239 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCKBRP32239 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.29■□□□□ 0.68
CCKBRP32239 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.28■□□□□ 0.68
CCKBRP32239 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCKBRP32239 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 AL353807.1-201ENST00000427475 662 ntBASIC19.28■□□□□ 0.68
CCKBRP32239 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 KRT16P5-201ENST00000455284 522 ntBASIC19.28■□□□□ 0.68
CCKBRP32239 AL355075.4-201ENST00000554988 638 ntBASIC19.28■□□□□ 0.68
CCKBRP32239 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CCKBRP32239 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCKBRP32239 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms