Protein–RNA interactions for Protein: P29539

RIF1, Telomere length regulator protein RIF1, yeastyeast

Predictions only

Length 1,916 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIF1P29539 RPL26BYGR034W 384 nt0.19□□□□□ -2.38
RIF1P29539 YJR087WYJR087W 351 nt0.19□□□□□ -2.38
RIF1P29539 YLR285C-AYLR285C-A 171 nt0.19□□□□□ -2.38
RIF1P29539 YOR108C-AYOR108C-A 210 nt0.19□□□□□ -2.38
RIF1P29539 VIK1YPL253C 1944 nt0.19□□□□□ -2.38
RIF1P29539 NPC2YDL046W 522 nt0.19□□□□□ -2.38
RIF1P29539 YHL041WYHL041W 450 nt0.19□□□□□ -2.38
RIF1P29539 YJL026C-AYJL026C-A 222 nt0.19□□□□□ -2.38
RIF1P29539 LEE1YPL054W 906 nt0.19□□□□□ -2.38
RIF1P29539 LOA1YPR139C 903 nt0.19□□□□□ -2.38
RIF1P29539 NOP9YJL010C 2001 nt0.18□□□□□ -2.38
RIF1P29539 YEL030C-AYEL030C-A 315 nt0.18□□□□□ -2.38
RIF1P29539 YKL023C-AYKL023C-A 228 nt0.18□□□□□ -2.38
RIF1P29539 RPB10YOR210W 213 nt0.18□□□□□ -2.38
RIF1P29539 YBR076C-AYBR076C-A 267 nt0.18□□□□□ -2.38
RIF1P29539 YDL011CYDL011C 324 nt0.17□□□□□ -2.38
RIF1P29539 YIL134C-AYIL134C-A 204 nt0.17□□□□□ -2.38
RIF1P29539 YKL068W-AYKL068W-A 237 nt0.17□□□□□ -2.38
RIF1P29539 MRPL31YKL138C 396 nt0.17□□□□□ -2.38
RIF1P29539 INP2YMR163C 2118 nt0.17□□□□□ -2.38
RIF1P29539 PBI2YNL015W 228 nt0.17□□□□□ -2.38
RIF1P29539 RAD34YDR314C 2079 nt0.16□□□□□ -2.38
RIF1P29539 CDC33YOL139C 642 nt0.15□□□□□ -2.39
RIF1P29539 ABF2YMR072W 552 nt0.15□□□□□ -2.39
RIF1P29539 YBR206WYBR206W 324 nt0.15□□□□□ -2.39
RIF1P29539 YDR029WYDR029W 315 nt0.14□□□□□ -2.39
RIF1P29539 YMR141W-AYMR141W-A 225 nt0.14□□□□□ -2.39
RIF1P29539 snR13snR13 124 nt0.14□□□□□ -2.39
RIF1P29539 YPL185WYPL185W 396 nt0.14□□□□□ -2.39
RIF1P29539 YAR053WYAR053W 297 nt0.13□□□□□ -2.39
RIF1P29539 YLR287CYLR287C 1068 nt0.13□□□□□ -2.39
RIF1P29539 YBL071CYBL071C 309 nt0.13□□□□□ -2.39
RIF1P29539 YCR001WYCR001W 315 nt0.13□□□□□ -2.39
RIF1P29539 YER076W-AYER076W-A 348 nt0.13□□□□□ -2.39
RIF1P29539 SCEIQ0160 708 nt0.13□□□□□ -2.39
RIF1P29539 YPL261CYPL261C 309 nt0.13□□□□□ -2.39
RIF1P29539 RPL26AYLR344W 384 nt0.12□□□□□ -2.39
RIF1P29539 YLR198CYLR198C 360 nt0.11□□□□□ -2.39
RIF1P29539 YPR153WYPR153W 423 nt0.11□□□□□ -2.39
RIF1P29539 YOR186C-AYOR186C-A 210 nt0.1□□□□□ -2.39
RIF1P29539 YPL182CYPL182C 384 nt0.1□□□□□ -2.39
RIF1P29539 SBH1YER087C-B 249 nt0.09□□□□□ -2.39
RIF1P29539 YER135CYER135C 393 nt0.09□□□□□ -2.39
RIF1P29539 YJR011CYJR011C 786 nt0.09□□□□□ -2.39
RIF1P29539 BER1YLR412W 825 nt0.09□□□□□ -2.39
RIF1P29539 BSC3YLR465C 309 nt0.09□□□□□ -2.39
RIF1P29539 YOR011W-AYOR011W-A 207 nt0.09□□□□□ -2.39
RIF1P29539 HMLALPHA2YCL067C 633 nt0.07□□□□□ -2.4
RIF1P29539 MATALPHA2YCR039C 633 nt0.07□□□□□ -2.4
RIF1P29539 ATG31YDR022C 591 nt0.07□□□□□ -2.4
RIF1P29539 YAP6YDR259C 1152 nt0.07□□□□□ -2.4
RIF1P29539 YIR018C-AYIR018C-A 138 nt0.07□□□□□ -2.4
RIF1P29539 FYV10YIL097W 1551 nt0.06□□□□□ -2.4
RIF1P29539 NNF2YGR089W 2811 nt0.06□□□□□ -2.4
RIF1P29539 HAL9YOL089C 3093 nt0.06□□□□□ -2.4
RIF1P29539 Q0255Q0255 1419 nt0.05□□□□□ -2.4
RIF1P29539 ULI1YFR026C 510 nt0.05□□□□□ -2.4
RIF1P29539 NIP100YPL174C 2607 nt0.05□□□□□ -2.4
RIF1P29539 YLR399W-AYLR399W-A 105 nt0.05□□□□□ -2.4
RIF1P29539 YNL058CYNL058C 951 nt0.05□□□□□ -2.4
RIF1P29539 ZEO1YOL109W 342 nt0.05□□□□□ -2.4
RIF1P29539 snR54snR54 86 nt0.05□□□□□ -2.4
RIF1P29539 RPL35AYDL191W 363 nt0.04□□□□□ -2.4
RIF1P29539 YNL211CYNL211C 261 nt0.04□□□□□ -2.4
RIF1P29539 FYV7YLR068W 456 nt0.03□□□□□ -2.4
RIF1P29539 snR72snR72 98 nt0.03□□□□□ -2.41
RIF1P29539 YPR160W-AYPR160W-A 81 nt0.03□□□□□ -2.41
RIF1P29539 ASE1YOR058C 2658 nt0.03□□□□□ -2.41
RIF1P29539 PTP2YOR208W 2253 nt0.01□□□□□ -2.41
RIF1P29539 GLG1YKR058W 1851 nt0.01□□□□□ -2.41
RIF1P29539 RPS20YHL015W 366 nt0.01□□□□□ -2.41
RIF1P29539 YLR334CYLR334C 381 nt0.01□□□□□ -2.41
RIF1P29539 YBL100W-BYBL100W-B 5313 nt0.01□□□□□ -2.41
RIF1P29539 PRP42YDR235W 1635 nt0.01□□□□□ -2.41
RIF1P29539 PRP5YBR237W 2550 nt0.01□□□□□ -2.41
RIF1P29539 YDL016CYDL016C 303 nt0.01□□□□□ -2.41
RIF1P29539 SDH7YDR511W 402 nt0.01□□□□□ -2.41
RIF1P29539 MRPL50YNR022C 420 nt0.01□□□□□ -2.41
RIF1P29539 ESP1YGR098C 4893 nt0□□□□□ -2.41
RIF1P29539 YFR012W-AYFR012W-A 87 nt0□□□□□ -2.41
RIF1P29539 COX5BYIL111W 456 nt0□□□□□ -2.41
RIF1P29539 YIR044CYIR044C 186 nt0□□□□□ -2.41
RIF1P29539 COX12YLR038C 252 nt0□□□□□ -2.41
RIF1P29539 YLR171WYLR171W 390 nt0□□□□□ -2.41
RIF1P29539 YPL068CYPL068C 882 nt0□□□□□ -2.41
RIF1P29539 URB1YKL014C 5295 nt-0.01□□□□□ -2.41
RIF1P29539 HMRA2YCR096C 360 nt-0.01□□□□□ -2.41
RIF1P29539 PAA1YDR071C 576 nt-0.01□□□□□ -2.41
RIF1P29539 RPF1YHR088W 888 nt-0.01□□□□□ -2.41
RIF1P29539 YHR125WYHR125W 306 nt-0.01□□□□□ -2.41
RIF1P29539 YNL319WYNL319W 441 nt-0.01□□□□□ -2.41
RIF1P29539 RCO1YMR075W 2055 nt-0.01□□□□□ -2.41
RIF1P29539 YDR344CYDR344C 444 nt-0.03□□□□□ -2.41
RIF1P29539 RPS25BYLR333C 327 nt-0.03□□□□□ -2.41
RIF1P29539 YAR047CYAR047C 321 nt-0.03□□□□□ -2.41
RIF1P29539 SSS1YDR086C 243 nt-0.04□□□□□ -2.42
RIF1P29539 YER006C-AYER006C-A 318 nt-0.04□□□□□ -2.42
RIF1P29539 YJL127W-AYJL127W-A 117 nt-0.04□□□□□ -2.42
RIF1P29539 SPO21YOL091W 1830 nt-0.04□□□□□ -2.42
RIF1P29539 DIE2YGR227W 1578 nt-0.04□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 53.2 ms