Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 tW(CCA)PtW(CCA)P 72 nt3.12□□□□□ -1.91
SPB4P25808 YMR175W-AYMR175W-A 195 nt3.12□□□□□ -1.91
SPB4P25808 MLH1YMR167W 2310 nt3.11□□□□□ -1.91
SPB4P25808 APL1YJR005W 2103 nt3.11□□□□□ -1.91
SPB4P25808 NEW1YPL226W 3591 nt3.11□□□□□ -1.91
SPB4P25808 PMP2YEL017C-A 132 nt3.11□□□□□ -1.91
SPB4P25808 COG4YPR105C 2586 nt3.11□□□□□ -1.91
SPB4P25808 PKH2YOL100W 3246 nt3.1□□□□□ -1.91
SPB4P25808 YPL150WYPL150W 2706 nt3.1□□□□□ -1.91
SPB4P25808 UBP15YMR304W 3693 nt3.1□□□□□ -1.91
SPB4P25808 YCR095W-AYCR095W-A 159 nt3.1□□□□□ -1.91
SPB4P25808 POL5YEL055C 3069 nt3.1□□□□□ -1.91
SPB4P25808 YCR038W-AYCR038W-A 126 nt3.09□□□□□ -1.91
SPB4P25808 YNL103W-AYNL103W-A 90 nt3.09□□□□□ -1.91
SPB4P25808 YCS4YLR272C 3531 nt3.09□□□□□ -1.92
SPB4P25808 PRP5YBR237W 2550 nt3.08□□□□□ -1.92
SPB4P25808 YCR087C-AYCR087C-A 462 nt3.08□□□□□ -1.92
SPB4P25808 RPL37BYDR500C 267 nt3.08□□□□□ -1.92
SPB4P25808 YKR075W-AYKR075W-A 270 nt3.07□□□□□ -1.92
SPB4P25808 CYR1YJL005W 6081 nt3.06□□□□□ -1.92
SPB4P25808 GCN2YDR283C 4980 nt3.06□□□□□ -1.92
SPB4P25808 NUT1YGL151W 3399 nt3.05□□□□□ -1.92
SPB4P25808 ADR1YDR216W 3972 nt3.05□□□□□ -1.92
SPB4P25808 LCL1YPL056C 306 nt3.05□□□□□ -1.92
SPB4P25808 YOR019WYOR019W 2193 nt3.05□□□□□ -1.92
SPB4P25808 YNL144CYNL144C 2223 nt3.04□□□□□ -1.92
SPB4P25808 PET309YLR067C 2898 nt3.04□□□□□ -1.92
SPB4P25808 RTT101YJL047C 2529 nt3.04□□□□□ -1.92
SPB4P25808 YDL206WYDL206W 2289 nt3.04□□□□□ -1.92
SPB4P25808 YIL174WYIL174W 228 nt3.03□□□□□ -1.92
SPB4P25808 YJL222W-AYJL222W-A 228 nt3.03□□□□□ -1.92
SPB4P25808 ALY2YJL084C 3141 nt3.03□□□□□ -1.92
SPB4P25808 PSD2YGR170W 3417 nt3.02□□□□□ -1.93
SPB4P25808 IST2YBR086C 2841 nt3.02□□□□□ -1.93
SPB4P25808 YGR109W-BYGR109W-B 4644 nt3.01□□□□□ -1.93
SPB4P25808 IRE1YHR079C 3348 nt3.01□□□□□ -1.93
SPB4P25808 YDR209CYDR209C 414 nt3.01□□□□□ -1.93
SPB4P25808 STF2YGR008C 255 nt3.01□□□□□ -1.93
SPB4P25808 YAL067W-AYAL067W-A 228 nt3.01□□□□□ -1.93
SPB4P25808 CMC4YMR194C-B 222 nt3.01□□□□□ -1.93
SPB4P25808 YNL067W-BYNL067W-B 141 nt3.01□□□□□ -1.93
SPB4P25808 CHS6YJL099W 2241 nt3□□□□□ -1.93
SPB4P25808 SEY1YOR165W 2331 nt3□□□□□ -1.93
SPB4P25808 ESC1YMR219W 4977 nt3□□□□□ -1.93
SPB4P25808 FRK1YPL141C 2598 nt3□□□□□ -1.93
SPB4P25808 PAN2YGL094C 3348 nt2.99□□□□□ -1.93
SPB4P25808 NUM1YDR150W 8247 nt2.99□□□□□ -1.93
SPB4P25808 AXL1YPR122W 3627 nt2.98□□□□□ -1.93
SPB4P25808 UFD2YDL190C 2886 nt2.98□□□□□ -1.93
SPB4P25808 RPM2YML091C 3609 nt2.98□□□□□ -1.93
SPB4P25808 YDL118WYDL118W 381 nt2.97□□□□□ -1.93
SPB4P25808 FKS3YMR306W 5358 nt2.96□□□□□ -1.94
SPB4P25808 IRC8YJL051W 2469 nt2.96□□□□□ -1.94
SPB4P25808 TRA1YHR099W 11235 nt2.96□□□□□ -1.94
SPB4P25808 YGL182CYGL182C 324 nt2.96□□□□□ -1.94
SPB4P25808 YLL020CYLL020C 306 nt2.96□□□□□ -1.94
SPB4P25808 BCK1YJL095W 4437 nt2.96□□□□□ -1.94
SPB4P25808 TIM9YEL020W-A 264 nt2.95□□□□□ -1.94
SPB4P25808 SOM1YEL059C-A 225 nt2.95□□□□□ -1.94
SPB4P25808 YLL054CYLL054C 2532 nt2.95□□□□□ -1.94
SPB4P25808 SFB2YNL049C 2631 nt2.95□□□□□ -1.94
SPB4P25808 SEC31YDL195W 3822 nt2.95□□□□□ -1.94
SPB4P25808 MGA2YIR033W 3342 nt2.94□□□□□ -1.94
SPB4P25808 LHS1YKL073W 2646 nt2.93□□□□□ -1.94
SPB4P25808 PDR1YGL013C 3207 nt2.93□□□□□ -1.94
SPB4P25808 SGS1YMR190C 4344 nt2.93□□□□□ -1.94
SPB4P25808 STE11YLR362W 2154 nt2.93□□□□□ -1.94
SPB4P25808 CSF1YLR087C 8877 nt2.93□□□□□ -1.94
SPB4P25808 RAV1YJR033C 4074 nt2.93□□□□□ -1.94
SPB4P25808 SEC26YDR238C 2922 nt2.92□□□□□ -1.94
SPB4P25808 HIR3YJR140C 4947 nt2.92□□□□□ -1.94
SPB4P25808 ROM2YLR371W 4071 nt2.92□□□□□ -1.94
SPB4P25808 SPO24YPR036W-A 204 nt2.92□□□□□ -1.94
SPB4P25808 SEC63YOR254C 1992 nt2.92□□□□□ -1.94
SPB4P25808 SGM1YJR134C 2124 nt2.92□□□□□ -1.94
SPB4P25808 HSL1YKL101W 4557 nt2.92□□□□□ -1.94
SPB4P25808 SRB8YCR081W 4284 nt2.91□□□□□ -1.94
SPB4P25808 TBS1YBR150C 3285 nt2.91□□□□□ -1.94
SPB4P25808 GIP3YPL137C 3831 nt2.91□□□□□ -1.94
SPB4P25808 BFR2YDR299W 1605 nt2.9□□□□□ -1.94
SPB4P25808 YKL100W-AYKL100W-A 90 nt2.9□□□□□ -1.95
SPB4P25808 STB6YKL072W 2301 nt2.9□□□□□ -1.95
SPB4P25808 YLR422WYLR422W 5799 nt2.89□□□□□ -1.95
SPB4P25808 EAF1YDR359C 2949 nt2.88□□□□□ -1.95
SPB4P25808 UTP21YLR409C 2820 nt2.87□□□□□ -1.95
SPB4P25808 RIF1YBR275C 5751 nt2.86□□□□□ -1.95
SPB4P25808 KCS1YDR017C 3153 nt2.86□□□□□ -1.95
SPB4P25808 YEF3YLR249W 3135 nt2.86□□□□□ -1.95
SPB4P25808 YGL123C-AYGL123C-A 231 nt2.86□□□□□ -1.95
SPB4P25808 EMC5YIL027C 426 nt2.86□□□□□ -1.95
SPB4P25808 COX5BYIL111W 456 nt2.85□□□□□ -1.95
SPB4P25808 MYO2YOR326W 4725 nt2.85□□□□□ -1.95
SPB4P25808 RAD9YDR217C 3930 nt2.84□□□□□ -1.95
SPB4P25808 RSM22YKL155C 1887 nt2.84□□□□□ -1.96
SPB4P25808 YBL039C-AYBL039C-A 84 nt2.83□□□□□ -1.96
SPB4P25808 CDC25YLR310C 4770 nt2.83□□□□□ -1.96
SPB4P25808 YER172C-AYER172C-A 381 nt2.82□□□□□ -1.96
SPB4P25808 UTP8YGR128C 2142 nt2.82□□□□□ -1.96
SPB4P25808 STH1YIL126W 4080 nt2.8□□□□□ -1.96
SPB4P25808 MDS3YGL197W 4464 nt2.79□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 56.4 ms