Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MMP8P22894 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
MMP8P22894 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.15■□□□□ 0.98
MMP8P22894 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.15■□□□□ 0.98
MMP8P22894 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
MMP8P22894 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP8P22894 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP8P22894 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.14■□□□□ 0.98
MMP8P22894 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
MMP8P22894 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP8P22894 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP8P22894 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
MMP8P22894 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
MMP8P22894 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MMP8P22894 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MMP8P22894 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP8P22894 AC023632.3-201ENST00000521633 145 ntBASIC21.14■□□□□ 0.97
MMP8P22894 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP8P22894 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
MMP8P22894 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP8P22894 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP8P22894 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.14■□□□□ 0.97
MMP8P22894 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MMP8P22894 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP8P22894 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
MMP8P22894 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP8P22894 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP8P22894 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MMP8P22894 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MMP8P22894 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP8P22894 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP8P22894 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP8P22894 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MMP8P22894 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP8P22894 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP8P22894 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.13■□□□□ 0.97
MMP8P22894 GPX1P1-201ENST00000388829 606 ntBASIC21.13■□□□□ 0.97
MMP8P22894 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.13■□□□□ 0.97
MMP8P22894 AC092118.2-201ENST00000613495 667 ntBASIC21.13■□□□□ 0.97
MMP8P22894 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.13■□□□□ 0.97
MMP8P22894 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MMP8P22894 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.13■□□□□ 0.97
MMP8P22894 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP8P22894 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP8P22894 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MMP8P22894 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MMP8P22894 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MMP8P22894 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.13■□□□□ 0.97
MMP8P22894 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP8P22894 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP8P22894 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MMP8P22894 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP8P22894 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
MMP8P22894 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP8P22894 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.12■□□□□ 0.97
MMP8P22894 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP8P22894 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.12■□□□□ 0.97
MMP8P22894 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP8P22894 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP8P22894 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.12■□□□□ 0.97
MMP8P22894 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP8P22894 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP8P22894 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP8P22894 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MMP8P22894 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MMP8P22894 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MMP8P22894 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.11■□□□□ 0.97
MMP8P22894 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.11■□□□□ 0.97
MMP8P22894 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.11■□□□□ 0.97
MMP8P22894 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.11■□□□□ 0.97
MMP8P22894 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.11■□□□□ 0.97
MMP8P22894 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MMP8P22894 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP8P22894 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.1■□□□□ 0.97
MMP8P22894 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.1■□□□□ 0.97
MMP8P22894 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.1■□□□□ 0.97
MMP8P22894 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP8P22894 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP8P22894 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP8P22894 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP8P22894 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP8P22894 HLA-G-202ENST00000376815 851 ntBASIC21.1■□□□□ 0.97
MMP8P22894 HLA-G-203ENST00000376818 1127 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms