Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL1P22362 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.3■□□□□ 0.36
CCL1P22362 AL031963.3-201ENST00000606441 850 ntBASIC17.3■□□□□ 0.36
CCL1P22362 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL1P22362 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL1P22362 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
CCL1P22362 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL1P22362 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL1P22362 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.3■□□□□ 0.36
CCL1P22362 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL1P22362 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL1P22362 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL1P22362 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCL1P22362 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL1P22362 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL1P22362 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCL1P22362 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL1P22362 KRT18P68-201ENST00000392293 1000 ntBASIC17.29■□□□□ 0.36
CCL1P22362 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL1P22362 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCL1P22362 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL1P22362 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL1P22362 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL1P22362 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL1P22362 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL1P22362 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL1P22362 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL1P22362 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL1P22362 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL1P22362 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL1P22362 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL1P22362 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL1P22362 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL1P22362 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL1P22362 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL1P22362 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL1P22362 CYP2T1P-201ENST00000432607 1285 ntBASIC17.28■□□□□ 0.36
CCL1P22362 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.28■□□□□ 0.36
CCL1P22362 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL1P22362 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL1P22362 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL1P22362 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL1P22362 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL1P22362 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL1P22362 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCL1P22362 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.27■□□□□ 0.36
CCL1P22362 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL1P22362 AC116562.4-201ENST00000641316 2276 ntBASIC17.27■□□□□ 0.36
CCL1P22362 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCL1P22362 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CCL1P22362 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL1P22362 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CCL1P22362 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.27■□□□□ 0.36
CCL1P22362 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL1P22362 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL1P22362 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL1P22362 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.27■□□□□ 0.36
CCL1P22362 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.27■□□□□ 0.36
CCL1P22362 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL1P22362 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL1P22362 CYP2T3P-201ENST00000601990 817 ntBASIC17.27■□□□□ 0.36
CCL1P22362 AC011767.1-201ENST00000617410 1153 ntBASIC17.27■□□□□ 0.36
CCL1P22362 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL1P22362 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.27■□□□□ 0.36
CCL1P22362 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.27■□□□□ 0.36
CCL1P22362 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCL1P22362 KRT8P20-201ENST00000423953 1409 ntBASIC17.27■□□□□ 0.35
CCL1P22362 KRT16P6-202ENST00000425692 1426 ntBASIC17.27■□□□□ 0.35
CCL1P22362 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
CCL1P22362 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCL1P22362 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCL1P22362 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCL1P22362 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.27■□□□□ 0.35
CCL1P22362 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.27■□□□□ 0.35
CCL1P22362 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCL1P22362 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCL1P22362 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CCL1P22362 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.27■□□□□ 0.35
CCL1P22362 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL1P22362 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 AC026271.2-201ENST00000428091 497 ntBASIC17.26■□□□□ 0.35
CCL1P22362 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.26■□□□□ 0.35
CCL1P22362 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.26■□□□□ 0.35
CCL1P22362 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 AC069236.1-201ENST00000604339 616 ntBASIC17.26■□□□□ 0.35
CCL1P22362 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL1P22362 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCL1P22362 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCL1P22362 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL1P22362 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms