Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSR1P21757 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.74■□□□□ 0.43
MSR1P21757 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MSR1P21757 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.74■□□□□ 0.43
MSR1P21757 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSR1P21757 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
MSR1P21757 AL391422.3-201ENST00000603791 2761 ntBASIC17.74■□□□□ 0.43
MSR1P21757 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.73■□□□□ 0.43
MSR1P21757 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MSR1P21757 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
MSR1P21757 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MSR1P21757 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
MSR1P21757 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.73■□□□□ 0.43
MSR1P21757 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.73■□□□□ 0.43
MSR1P21757 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MSR1P21757 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MSR1P21757 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MSR1P21757 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
MSR1P21757 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MSR1P21757 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MSR1P21757 MIR663A-201ENST00000385250 93 ntBASIC17.73■□□□□ 0.43
MSR1P21757 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MSR1P21757 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.73■□□□□ 0.43
MSR1P21757 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.73■□□□□ 0.43
MSR1P21757 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.73■□□□□ 0.43
MSR1P21757 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
MSR1P21757 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MSR1P21757 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MSR1P21757 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MSR1P21757 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MSR1P21757 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MSR1P21757 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
MSR1P21757 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.72■□□□□ 0.43
MSR1P21757 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MSR1P21757 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.72■□□□□ 0.43
MSR1P21757 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MSR1P21757 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MSR1P21757 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MSR1P21757 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.72■□□□□ 0.43
MSR1P21757 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.72■□□□□ 0.43
MSR1P21757 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MSR1P21757 AF201337.1-201ENST00000520239 748 ntBASIC17.72■□□□□ 0.43
MSR1P21757 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MSR1P21757 RAP2CP1-201ENST00000605103 478 ntBASIC17.72■□□□□ 0.43
MSR1P21757 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MSR1P21757 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MSR1P21757 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MSR1P21757 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MSR1P21757 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MSR1P21757 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.71■□□□□ 0.43
MSR1P21757 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.71■□□□□ 0.43
MSR1P21757 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.71■□□□□ 0.43
MSR1P21757 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MSR1P21757 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.71■□□□□ 0.43
MSR1P21757 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.71■□□□□ 0.43
MSR1P21757 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.71■□□□□ 0.43
MSR1P21757 AL050303.2-201ENST00000619798 666 ntBASIC17.71■□□□□ 0.43
MSR1P21757 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MSR1P21757 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
MSR1P21757 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.71■□□□□ 0.43
MSR1P21757 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MSR1P21757 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.71■□□□□ 0.43
MSR1P21757 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
MSR1P21757 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MSR1P21757 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MSR1P21757 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.71■□□□□ 0.43
MSR1P21757 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.71■□□□□ 0.43
MSR1P21757 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.71■□□□□ 0.43
MSR1P21757 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
MSR1P21757 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.71■□□□□ 0.43
MSR1P21757 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MSR1P21757 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
MSR1P21757 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
MSR1P21757 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
MSR1P21757 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
MSR1P21757 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
MSR1P21757 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MSR1P21757 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.7■□□□□ 0.42
MSR1P21757 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.7■□□□□ 0.42
MSR1P21757 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.7■□□□□ 0.42
MSR1P21757 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MSR1P21757 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
MSR1P21757 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MSR1P21757 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MSR1P21757 AC105036.2-201ENST00000569468 176 ntBASIC17.7■□□□□ 0.42
MSR1P21757 SLC25A24-204ENST00000569674 2357 ntBASIC17.7■□□□□ 0.42
MSR1P21757 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSR1P21757 MKRN4P-201ENST00000444706 1521 ntBASIC17.7■□□□□ 0.42
MSR1P21757 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSR1P21757 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MSR1P21757 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.7■□□□□ 0.42
MSR1P21757 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.7■□□□□ 0.42
MSR1P21757 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MSR1P21757 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MSR1P21757 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.7■□□□□ 0.42
MSR1P21757 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
MSR1P21757 AC112907.3-201ENST00000577781 2400 ntBASIC17.7■□□□□ 0.42
MSR1P21757 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSR1P21757 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSR1P21757 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms