Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 PTBP1P-201ENST00000554374 1601 ntBASIC20.27■□□□□ 0.84
HLA-DPA1P20036 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 AC099778.1-201ENST00000568593 1911 ntBASIC20.27■□□□□ 0.84
HLA-DPA1P20036 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-DPA1P20036 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.27■□□□□ 0.83
HLA-DPA1P20036 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
HLA-DPA1P20036 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HLA-DPA1P20036 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HLA-DPA1P20036 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.27■□□□□ 0.83
HLA-DPA1P20036 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPA1P20036 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 AC073130.3-201ENST00000624389 2278 ntBASIC20.25■□□□□ 0.83
HLA-DPA1P20036 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 MIR4758-201ENST00000577688 71 ntBASIC20.25■□□□□ 0.83
HLA-DPA1P20036 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 AC138932.1-201ENST00000534164 6830 ntBASIC20.25■□□□□ 0.83
HLA-DPA1P20036 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPA1P20036 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 AL031963.3-201ENST00000606441 850 ntBASIC20.24■□□□□ 0.83
HLA-DPA1P20036 AL109923.1-201ENST00000618799 583 ntBASIC20.24■□□□□ 0.83
HLA-DPA1P20036 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 BX119927.1-201ENST00000636596 1552 ntBASIC20.24■□□□□ 0.83
HLA-DPA1P20036 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPA1P20036 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 ID1-201ENST00000376105 1233 ntBASIC20.23■□□□□ 0.83
HLA-DPA1P20036 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 DUSP5P2-201ENST00000426873 1033 ntBASIC20.23■□□□□ 0.83
HLA-DPA1P20036 AC023632.3-201ENST00000521633 145 ntBASIC20.23■□□□□ 0.83
HLA-DPA1P20036 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPA1P20036 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms