Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ERCC3P19447 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
ERCC3P19447 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
ERCC3P19447 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.25■■□□□ 1.31
ERCC3P19447 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ERCC3P19447 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
ERCC3P19447 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ERCC3P19447 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ERCC3P19447 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.24■■□□□ 1.31
ERCC3P19447 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ERCC3P19447 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.24■■□□□ 1.31
ERCC3P19447 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ERCC3P19447 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ERCC3P19447 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ERCC3P19447 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
ERCC3P19447 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.24■■□□□ 1.31
ERCC3P19447 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.24■■□□□ 1.31
ERCC3P19447 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.24■■□□□ 1.31
ERCC3P19447 LINC01023-201ENST00000606054 436 ntBASIC23.24■■□□□ 1.31
ERCC3P19447 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.24■■□□□ 1.31
ERCC3P19447 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.24■■□□□ 1.31
ERCC3P19447 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
ERCC3P19447 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.24■■□□□ 1.31
ERCC3P19447 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ERCC3P19447 FEM1AP4-201ENST00000443167 1987 ntBASIC23.23■■□□□ 1.31
ERCC3P19447 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.23■■□□□ 1.31
ERCC3P19447 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
ERCC3P19447 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ERCC3P19447 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ERCC3P19447 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.23■■□□□ 1.31
ERCC3P19447 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ERCC3P19447 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ERCC3P19447 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ERCC3P19447 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ERCC3P19447 FAM210CP-201ENST00000445714 574 ntBASIC23.23■■□□□ 1.31
ERCC3P19447 TSPY15P-201ENST00000457163 923 ntBASIC23.23■■□□□ 1.31
ERCC3P19447 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.23■■□□□ 1.31
ERCC3P19447 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.23■■□□□ 1.31
ERCC3P19447 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ERCC3P19447 RARRES2P10-201ENST00000564312 460 ntBASIC23.23■■□□□ 1.31
ERCC3P19447 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
ERCC3P19447 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.23■■□□□ 1.31
ERCC3P19447 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ERCC3P19447 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
ERCC3P19447 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ERCC3P19447 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ERCC3P19447 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ERCC3P19447 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ERCC3P19447 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ERCC3P19447 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.22■■□□□ 1.31
ERCC3P19447 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
ERCC3P19447 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.22■■□□□ 1.31
ERCC3P19447 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.22■■□□□ 1.31
ERCC3P19447 PRKY-204ENST00000533551 1019 ntBASIC23.22■■□□□ 1.31
ERCC3P19447 MIR4785-201ENST00000585005 73 ntBASIC23.22■■□□□ 1.31
ERCC3P19447 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.22■■□□□ 1.31
ERCC3P19447 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ERCC3P19447 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ERCC3P19447 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.21■■□□□ 1.31
ERCC3P19447 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ERCC3P19447 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ERCC3P19447 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ERCC3P19447 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ERCC3P19447 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.21■■□□□ 1.31
ERCC3P19447 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ERCC3P19447 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
ERCC3P19447 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.21■■□□□ 1.31
ERCC3P19447 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
ERCC3P19447 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
ERCC3P19447 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
ERCC3P19447 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ERCC3P19447 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ERCC3P19447 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ERCC3P19447 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ERCC3P19447 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.21■■□□□ 1.31
ERCC3P19447 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.21■■□□□ 1.31
ERCC3P19447 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.2■■□□□ 1.3
ERCC3P19447 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.2■■□□□ 1.3
ERCC3P19447 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.2■■□□□ 1.3
ERCC3P19447 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ERCC3P19447 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.2■■□□□ 1.3
ERCC3P19447 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
ERCC3P19447 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ERCC3P19447 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.2■■□□□ 1.3
ERCC3P19447 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.2■■□□□ 1.3
ERCC3P19447 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.2■■□□□ 1.3
ERCC3P19447 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.2■■□□□ 1.3
ERCC3P19447 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.2■■□□□ 1.3
ERCC3P19447 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.2■■□□□ 1.3
ERCC3P19447 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.2■■□□□ 1.3
ERCC3P19447 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.2■■□□□ 1.3
ERCC3P19447 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ERCC3P19447 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.2■■□□□ 1.3
ERCC3P19447 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.2■■□□□ 1.3
ERCC3P19447 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.2■■□□□ 1.3
ERCC3P19447 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ERCC3P19447 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ERCC3P19447 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ERCC3P19447 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ERCC3P19447 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms