Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRAFP15056 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
BRAFP15056 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.59■□□□□ 0.89
BRAFP15056 AC061975.6-201ENST00000579045 1553 ntBASIC20.59■□□□□ 0.89
BRAFP15056 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
BRAFP15056 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRAFP15056 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.58■□□□□ 0.89
BRAFP15056 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRAFP15056 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRAFP15056 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRAFP15056 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRAFP15056 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
BRAFP15056 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.58■□□□□ 0.89
BRAFP15056 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRAFP15056 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRAFP15056 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRAFP15056 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
BRAFP15056 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.58■□□□□ 0.88
BRAFP15056 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRAFP15056 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
BRAFP15056 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BRAFP15056 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BRAFP15056 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
BRAFP15056 AL158211.5-201ENST00000623583 2518 ntBASIC20.58■□□□□ 0.88
BRAFP15056 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
BRAFP15056 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRAFP15056 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
BRAFP15056 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRAFP15056 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRAFP15056 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRAFP15056 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
BRAFP15056 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRAFP15056 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.57■□□□□ 0.88
BRAFP15056 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.57■□□□□ 0.88
BRAFP15056 SLC7A5P1-201ENST00000568957 537 ntBASIC20.57■□□□□ 0.88
BRAFP15056 AC008175.2-201ENST00000612840 297 ntBASIC20.57■□□□□ 0.88
BRAFP15056 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRAFP15056 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRAFP15056 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRAFP15056 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.57■□□□□ 0.88
BRAFP15056 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
BRAFP15056 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRAFP15056 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.57■□□□□ 0.88
BRAFP15056 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.57■□□□□ 0.88
BRAFP15056 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRAFP15056 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.57■□□□□ 0.88
BRAFP15056 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.57■□□□□ 0.88
BRAFP15056 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRAFP15056 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.56■□□□□ 0.88
BRAFP15056 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.56■□□□□ 0.88
BRAFP15056 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.56■□□□□ 0.88
BRAFP15056 POU5F1P4-201ENST00000413175 1085 ntBASIC20.56■□□□□ 0.88
BRAFP15056 AC026185.1-201ENST00000445748 174 ntBASIC20.56■□□□□ 0.88
BRAFP15056 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.56■□□□□ 0.88
BRAFP15056 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.56■□□□□ 0.88
BRAFP15056 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.56■□□□□ 0.88
BRAFP15056 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
BRAFP15056 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRAFP15056 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.56■□□□□ 0.88
BRAFP15056 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
BRAFP15056 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.55■□□□□ 0.88
BRAFP15056 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.55■□□□□ 0.88
BRAFP15056 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.55■□□□□ 0.88
BRAFP15056 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRAFP15056 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
BRAFP15056 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.55■□□□□ 0.88
BRAFP15056 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.55■□□□□ 0.88
BRAFP15056 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRAFP15056 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRAFP15056 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRAFP15056 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.55■□□□□ 0.88
BRAFP15056 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.55■□□□□ 0.88
BRAFP15056 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.55■□□□□ 0.88
BRAFP15056 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRAFP15056 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRAFP15056 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRAFP15056 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
BRAFP15056 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
BRAFP15056 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.54■□□□□ 0.88
BRAFP15056 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRAFP15056 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.54■□□□□ 0.88
BRAFP15056 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRAFP15056 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRAFP15056 CROCCP5-201ENST00000436658 830 ntBASIC20.54■□□□□ 0.88
BRAFP15056 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRAFP15056 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.54■□□□□ 0.88
BRAFP15056 AC010536.3-201ENST00000620306 533 ntBASIC20.54■□□□□ 0.88
BRAFP15056 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRAFP15056 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms