Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.78■□□□□ 0.76
RBP1P09455 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.78■□□□□ 0.76
RBP1P09455 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RBP1P09455 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RBP1P09455 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RBP1P09455 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.78■□□□□ 0.76
RBP1P09455 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RBP1P09455 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
RBP1P09455 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RBP1P09455 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.78■□□□□ 0.76
RBP1P09455 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RBP1P09455 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RBP1P09455 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RBP1P09455 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
RBP1P09455 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
RBP1P09455 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RBP1P09455 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.77■□□□□ 0.76
RBP1P09455 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.77■□□□□ 0.76
RBP1P09455 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RBP1P09455 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RBP1P09455 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RBP1P09455 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RBP1P09455 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
RBP1P09455 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.77■□□□□ 0.76
RBP1P09455 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RBP1P09455 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.77■□□□□ 0.76
RBP1P09455 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.77■□□□□ 0.76
RBP1P09455 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.77■□□□□ 0.76
RBP1P09455 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RBP1P09455 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.77■□□□□ 0.76
RBP1P09455 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.77■□□□□ 0.76
RBP1P09455 AC013268.1-206ENST00000638368 961 ntBASIC19.77■□□□□ 0.76
RBP1P09455 AC112229.1-201ENST00000639295 961 ntBASIC19.77■□□□□ 0.76
RBP1P09455 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RBP1P09455 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RBP1P09455 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RBP1P09455 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.77■□□□□ 0.76
RBP1P09455 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
RBP1P09455 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RBP1P09455 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RBP1P09455 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.76■□□□□ 0.75
RBP1P09455 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RBP1P09455 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RBP1P09455 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RBP1P09455 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RBP1P09455 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RBP1P09455 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RBP1P09455 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RBP1P09455 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RBP1P09455 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RBP1P09455 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.76■□□□□ 0.75
RBP1P09455 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RBP1P09455 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.76■□□□□ 0.75
RBP1P09455 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RBP1P09455 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RBP1P09455 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.76■□□□□ 0.75
RBP1P09455 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RBP1P09455 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.75■□□□□ 0.75
RBP1P09455 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.75■□□□□ 0.75
RBP1P09455 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RBP1P09455 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RBP1P09455 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.75■□□□□ 0.75
RBP1P09455 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RBP1P09455 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RBP1P09455 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RBP1P09455 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RBP1P09455 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.75■□□□□ 0.75
RBP1P09455 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.75■□□□□ 0.75
RBP1P09455 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.75■□□□□ 0.75
RBP1P09455 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.75■□□□□ 0.75
RBP1P09455 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
RBP1P09455 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RBP1P09455 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RBP1P09455 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.75■□□□□ 0.75
RBP1P09455 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RBP1P09455 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.75■□□□□ 0.75
RBP1P09455 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.75■□□□□ 0.75
RBP1P09455 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.75■□□□□ 0.75
RBP1P09455 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RBP1P09455 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RBP1P09455 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RBP1P09455 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.74■□□□□ 0.75
RBP1P09455 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.74■□□□□ 0.75
RBP1P09455 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.74■□□□□ 0.75
RBP1P09455 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.74■□□□□ 0.75
RBP1P09455 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RBP1P09455 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RBP1P09455 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RBP1P09455 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.74■□□□□ 0.75
RBP1P09455 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RBP1P09455 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.74■□□□□ 0.75
RBP1P09455 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.74■□□□□ 0.75
RBP1P09455 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.74■□□□□ 0.75
RBP1P09455 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RBP1P09455 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RBP1P09455 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RBP1P09455 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RBP1P09455 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RBP1P09455 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RBP1P09455 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms