Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBP04114 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOBP04114 FAM207BP-201ENST00000447172 505 ntBASIC12.64□□□□□ -0.39
APOBP04114 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.64□□□□□ -0.39
APOBP04114 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.64□□□□□ -0.39
APOBP04114 AL121906.2-201ENST00000621597 723 ntBASIC12.64□□□□□ -0.39
APOBP04114 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBP04114 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOBP04114 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBP04114 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBP04114 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
APOBP04114 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.64□□□□□ -0.39
APOBP04114 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOBP04114 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.64□□□□□ -0.39
APOBP04114 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.64□□□□□ -0.39
APOBP04114 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBP04114 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.64□□□□□ -0.39
APOBP04114 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.64□□□□□ -0.39
APOBP04114 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBP04114 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOBP04114 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBP04114 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.63□□□□□ -0.39
APOBP04114 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
APOBP04114 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBP04114 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOBP04114 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOBP04114 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
APOBP04114 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.63□□□□□ -0.39
APOBP04114 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.63□□□□□ -0.39
APOBP04114 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBP04114 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBP04114 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBP04114 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOBP04114 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBP04114 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
APOBP04114 TERT-206ENST00000508104 2486 ntTSL 5 BASIC12.63□□□□□ -0.39
APOBP04114 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBP04114 YBX1P2-201ENST00000489612 999 ntBASIC12.63□□□□□ -0.39
APOBP04114 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.63□□□□□ -0.39
APOBP04114 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.63□□□□□ -0.39
APOBP04114 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOBP04114 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBP04114 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBP04114 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBP04114 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
APOBP04114 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBP04114 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBP04114 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBP04114 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC12.62□□□□□ -0.39
APOBP04114 EGLN1P1-201ENST00000531623 762 ntBASIC12.62□□□□□ -0.39
APOBP04114 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBP04114 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.62□□□□□ -0.39
APOBP04114 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBP04114 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
APOBP04114 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBP04114 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.62□□□□□ -0.39
APOBP04114 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
APOBP04114 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.62□□□□□ -0.39
APOBP04114 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBP04114 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
APOBP04114 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBP04114 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.62□□□□□ -0.39
APOBP04114 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBP04114 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBP04114 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.62□□□□□ -0.39
APOBP04114 AC091076.1-201ENST00000610741 619 ntBASIC12.62□□□□□ -0.39
APOBP04114 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBP04114 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBP04114 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBP04114 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 FAM86EP-206ENST00000510506 987 ntBASIC12.61□□□□□ -0.39
APOBP04114 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.61□□□□□ -0.39
APOBP04114 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.61□□□□□ -0.39
APOBP04114 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBP04114 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.61□□□□□ -0.39
APOBP04114 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBP04114 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
APOBP04114 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
APOBP04114 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBP04114 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.61□□□□□ -0.39
APOBP04114 AL121956.5-201ENST00000625261 221 ntBASIC12.61□□□□□ -0.39
APOBP04114 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.61□□□□□ -0.39
APOBP04114 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBP04114 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOBP04114 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBP04114 AC004980.1-204ENST00000429707 299 ntBASIC12.61□□□□□ -0.39
APOBP04114 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms