Protein–RNA interactions for Protein: P02381

VAR1, Ribosomal protein VAR1, mitochondrial, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAR1P02381 tT(AGU)O1tT(AGU)O1 73 nt0.52□□□□□ -2.33
VAR1P02381 tT(AGU)O2tT(AGU)O2 73 nt0.52□□□□□ -2.33
VAR1P02381 PAM16YJL104W 450 nt0.52□□□□□ -2.33
VAR1P02381 YKL202WYKL202W 582 nt0.52□□□□□ -2.33
VAR1P02381 YOL160WYOL160W 342 nt0.52□□□□□ -2.33
VAR1P02381 WAR1YML076C 2835 nt0.52□□□□□ -2.33
VAR1P02381 PDE2YOR360C 1581 nt0.52□□□□□ -2.33
VAR1P02381 PKH2YOL100W 3246 nt0.52□□□□□ -2.33
VAR1P02381 YDL073WYDL073W 2955 nt0.51□□□□□ -2.33
VAR1P02381 YDL196WYDL196W 330 nt0.51□□□□□ -2.33
VAR1P02381 RPS20YHL015W 366 nt0.51□□□□□ -2.33
VAR1P02381 YJL007CYJL007C 315 nt0.51□□□□□ -2.33
VAR1P02381 PRM3YPL192C 402 nt0.51□□□□□ -2.33
VAR1P02381 PRP16YKR086W 3216 nt0.51□□□□□ -2.33
VAR1P02381 YML002WYML002W 2214 nt0.5□□□□□ -2.33
VAR1P02381 RAD34YDR314C 2079 nt0.5□□□□□ -2.33
VAR1P02381 MMS4YBR098W 2076 nt0.5□□□□□ -2.33
VAR1P02381 YDR344CYDR344C 444 nt0.5□□□□□ -2.33
VAR1P02381 YER079WYER079W 633 nt0.5□□□□□ -2.33
VAR1P02381 YGR174W-AYGR174W-A 87 nt0.5□□□□□ -2.33
VAR1P02381 YJR011CYJR011C 786 nt0.5□□□□□ -2.33
VAR1P02381 INP2YMR163C 2118 nt0.49□□□□□ -2.33
VAR1P02381 CSN9YDR179C 489 nt0.49□□□□□ -2.33
VAR1P02381 YER137W-AYER137W-A 306 nt0.49□□□□□ -2.33
VAR1P02381 MAM33YIL070C 801 nt0.49□□□□□ -2.33
VAR1P02381 YOR293C-AYOR293C-A 150 nt0.49□□□□□ -2.33
VAR1P02381 YPL185WYPL185W 396 nt0.49□□□□□ -2.33
VAR1P02381 YBR064WYBR064W 429 nt0.49□□□□□ -2.33
VAR1P02381 YBR285WYBR285W 435 nt0.49□□□□□ -2.33
VAR1P02381 BFR2YDR299W 1605 nt0.49□□□□□ -2.33
VAR1P02381 GPG1YGL121C 381 nt0.48□□□□□ -2.33
VAR1P02381 ECM12YHR021W-A 456 nt0.48□□□□□ -2.33
VAR1P02381 YNL058CYNL058C 951 nt0.48□□□□□ -2.33
VAR1P02381 YOR072W-AYOR072W-A 249 nt0.48□□□□□ -2.33
VAR1P02381 YBR206WYBR206W 324 nt0.48□□□□□ -2.33
VAR1P02381 YDR426CYDR426C 378 nt0.47□□□□□ -2.33
VAR1P02381 IES4YOR189W 351 nt0.47□□□□□ -2.33
VAR1P02381 YPR002C-AYPR002C-A 198 nt0.47□□□□□ -2.33
VAR1P02381 MCM10YIL150C 1716 nt0.47□□□□□ -2.33
VAR1P02381 ATG31YDR022C 591 nt0.46□□□□□ -2.34
VAR1P02381 ALG13YGL047W 609 nt0.46□□□□□ -2.34
VAR1P02381 YOR108C-AYOR108C-A 210 nt0.46□□□□□ -2.34
VAR1P02381 LEE1YPL054W 906 nt0.46□□□□□ -2.34
VAR1P02381 RIM20YOR275C 1986 nt0.46□□□□□ -2.34
VAR1P02381 UTP10YJL109C 5310 nt0.45□□□□□ -2.34
VAR1P02381 AGA2YGL032C 264 nt0.45□□□□□ -2.34
VAR1P02381 tW(UCA)QtW(UCA)Q 74 nt0.45□□□□□ -2.34
VAR1P02381 YML007C-AYML007C-A 111 nt0.45□□□□□ -2.34
VAR1P02381 YPL261CYPL261C 309 nt0.45□□□□□ -2.34
VAR1P02381 ALY2YJL084C 3141 nt0.44□□□□□ -2.34
VAR1P02381 YLR264C-AYLR264C-A 117 nt0.44□□□□□ -2.34
VAR1P02381 YMR290W-AYMR290W-A 348 nt0.44□□□□□ -2.34
VAR1P02381 DBP6YNR038W 1890 nt0.44□□□□□ -2.34
VAR1P02381 YLL007CYLL007C 1998 nt0.43□□□□□ -2.34
VAR1P02381 YFR012W-AYFR012W-A 87 nt0.43□□□□□ -2.34
VAR1P02381 YHR138CYHR138C 345 nt0.43□□□□□ -2.34
VAR1P02381 RPL38YLR325C 237 nt0.43□□□□□ -2.34
VAR1P02381 CUL3YGR003W 2235 nt0.42□□□□□ -2.34
VAR1P02381 LTE1YAL024C 4308 nt0.42□□□□□ -2.34
VAR1P02381 OLI1Q0130 231 nt0.42□□□□□ -2.34
VAR1P02381 BSC3YLR465C 309 nt0.42□□□□□ -2.34
VAR1P02381 YNL324WYNL324W 396 nt0.42□□□□□ -2.34
VAR1P02381 NIP100YPL174C 2607 nt0.42□□□□□ -2.34
VAR1P02381 YMR160WYMR160W 2451 nt0.41□□□□□ -2.34
VAR1P02381 YKL063CYKL063C 504 nt0.41□□□□□ -2.34
VAR1P02381 OST1YJL002C 1431 nt0.4□□□□□ -2.34
VAR1P02381 YAR029WYAR029W 225 nt0.4□□□□□ -2.35
VAR1P02381 YAR053WYAR053W 297 nt0.4□□□□□ -2.35
VAR1P02381 YLR222C-AYLR222C-A 231 nt0.4□□□□□ -2.35
VAR1P02381 YOR053WYOR053W 342 nt0.4□□□□□ -2.35
VAR1P02381 YOR121CYOR121C 306 nt0.4□□□□□ -2.35
VAR1P02381 YCK3YER123W 1575 nt0.4□□□□□ -2.35
VAR1P02381 RPL35AYDL191W 363 nt0.39□□□□□ -2.35
VAR1P02381 YHL042WYHL042W 453 nt0.39□□□□□ -2.35
VAR1P02381 YLR334CYLR334C 381 nt0.39□□□□□ -2.35
VAR1P02381 YMR001C-AYMR001C-A 231 nt0.39□□□□□ -2.35
VAR1P02381 YOR011W-AYOR011W-A 207 nt0.39□□□□□ -2.35
VAR1P02381 SGF11YPL047W 300 nt0.39□□□□□ -2.35
VAR1P02381 FMP27YLR454W 7887 nt0.39□□□□□ -2.35
VAR1P02381 SSS1YDR086C 243 nt0.38□□□□□ -2.35
VAR1P02381 ISD11YER048W-A 285 nt0.38□□□□□ -2.35
VAR1P02381 VAR1Q0140 1197 nt0.38□□□□□ -2.35
VAR1P02381 INA22YIR024C 651 nt0.38□□□□□ -2.35
VAR1P02381 PCC1YKR095W-A 267 nt0.38□□□□□ -2.35
VAR1P02381 YNL211CYNL211C 261 nt0.38□□□□□ -2.35
VAR1P02381 CHS6YJL099W 2241 nt0.38□□□□□ -2.35
VAR1P02381 NPR2YEL062W 1848 nt0.38□□□□□ -2.35
VAR1P02381 NOP9YJL010C 2001 nt0.37□□□□□ -2.35
VAR1P02381 PAN2YGL094C 3348 nt0.37□□□□□ -2.35
VAR1P02381 PMP1YCR024C-A 123 nt0.36□□□□□ -2.35
VAR1P02381 YHR063W-AYHR063W-A 336 nt0.36□□□□□ -2.35
VAR1P02381 YIR044CYIR044C 186 nt0.36□□□□□ -2.35
VAR1P02381 YAL068W-AYAL068W-A 255 nt0.36□□□□□ -2.35
VAR1P02381 YOR029WYOR029W 336 nt0.36□□□□□ -2.35
VAR1P02381 PTP2YOR208W 2253 nt0.36□□□□□ -2.35
VAR1P02381 ASE1YOR058C 2658 nt0.35□□□□□ -2.35
VAR1P02381 YOR192C-BYOR192C-B 5313 nt0.35□□□□□ -2.35
VAR1P02381 YDR048CYDR048C 315 nt0.35□□□□□ -2.35
VAR1P02381 TAR1YLR154W-C 375 nt0.35□□□□□ -2.35
VAR1P02381 RPS25BYLR333C 327 nt0.35□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 77.5 ms