Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TIMP1P01033 AC063952.2-201ENST00000498792 1227 ntBASIC21.87■■□□□ 1.09
TIMP1P01033 AC022616.7-201ENST00000525383 220 ntBASIC21.87■■□□□ 1.09
TIMP1P01033 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.87■■□□□ 1.09
TIMP1P01033 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.87■■□□□ 1.09
TIMP1P01033 LINC01238-205ENST00000567549 1107 ntBASIC21.87■■□□□ 1.09
TIMP1P01033 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.87■■□□□ 1.09
TIMP1P01033 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TIMP1P01033 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.87■■□□□ 1.09
TIMP1P01033 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TIMP1P01033 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TIMP1P01033 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TIMP1P01033 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.86■■□□□ 1.09
TIMP1P01033 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TIMP1P01033 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TIMP1P01033 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.86■■□□□ 1.09
TIMP1P01033 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TIMP1P01033 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TIMP1P01033 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.86■■□□□ 1.09
TIMP1P01033 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TIMP1P01033 AC128688.1-201ENST00000487626 519 ntBASIC21.86■■□□□ 1.09
TIMP1P01033 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.86■■□□□ 1.09
TIMP1P01033 DGCR10-201ENST00000609839 495 ntBASIC21.86■■□□□ 1.09
TIMP1P01033 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TIMP1P01033 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TIMP1P01033 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.86■■□□□ 1.09
TIMP1P01033 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TIMP1P01033 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TIMP1P01033 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
TIMP1P01033 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.85■■□□□ 1.09
TIMP1P01033 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TIMP1P01033 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TIMP1P01033 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TIMP1P01033 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TIMP1P01033 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.85■■□□□ 1.09
TIMP1P01033 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.85■■□□□ 1.09
TIMP1P01033 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TIMP1P01033 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.85■■□□□ 1.09
TIMP1P01033 AL445675.2-201ENST00000620291 557 ntBASIC21.85■■□□□ 1.09
TIMP1P01033 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TIMP1P01033 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
TIMP1P01033 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.84■■□□□ 1.09
TIMP1P01033 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TIMP1P01033 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TIMP1P01033 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.84■■□□□ 1.09
TIMP1P01033 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TIMP1P01033 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TIMP1P01033 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TIMP1P01033 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TIMP1P01033 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.84■■□□□ 1.09
TIMP1P01033 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TIMP1P01033 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.84■■□□□ 1.09
TIMP1P01033 B3GAT3P1-201ENST00000471720 806 ntBASIC21.84■■□□□ 1.09
TIMP1P01033 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TIMP1P01033 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.84■■□□□ 1.09
TIMP1P01033 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.84■■□□□ 1.09
TIMP1P01033 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.84■■□□□ 1.09
TIMP1P01033 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.84■■□□□ 1.09
TIMP1P01033 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.84■■□□□ 1.09
TIMP1P01033 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
TIMP1P01033 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.84■■□□□ 1.09
TIMP1P01033 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TIMP1P01033 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TIMP1P01033 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TIMP1P01033 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TIMP1P01033 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TIMP1P01033 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.83■■□□□ 1.09
TIMP1P01033 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.83■■□□□ 1.09
TIMP1P01033 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TIMP1P01033 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
TIMP1P01033 C1QL1P1-201ENST00000568105 661 ntBASIC21.83■■□□□ 1.09
TIMP1P01033 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.83■■□□□ 1.09
TIMP1P01033 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TIMP1P01033 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TIMP1P01033 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TIMP1P01033 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TIMP1P01033 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TIMP1P01033 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.83■■□□□ 1.08
TIMP1P01033 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TIMP1P01033 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TIMP1P01033 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TIMP1P01033 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.82■■□□□ 1.08
TIMP1P01033 PTBP1P-201ENST00000554374 1601 ntBASIC21.82■■□□□ 1.08
TIMP1P01033 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.82■■□□□ 1.08
TIMP1P01033 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TIMP1P01033 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TIMP1P01033 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.82■■□□□ 1.08
TIMP1P01033 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.82■■□□□ 1.08
TIMP1P01033 AC097488.1-201ENST00000507834 756 ntBASIC21.82■■□□□ 1.08
TIMP1P01033 FAM87A-204ENST00000613235 858 ntBASIC21.82■■□□□ 1.08
TIMP1P01033 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.82■■□□□ 1.08
TIMP1P01033 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.82■■□□□ 1.08
TIMP1P01033 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
TIMP1P01033 C9orf163-202ENST00000624034 2573 ntBASIC21.82■■□□□ 1.08
TIMP1P01033 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.82■■□□□ 1.08
TIMP1P01033 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TIMP1P01033 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.81■■□□□ 1.08
TIMP1P01033 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TIMP1P01033 CRYGFP-201ENST00000418459 633 ntBASIC21.81■■□□□ 1.08
TIMP1P01033 AC011506.1-201ENST00000474329 610 ntBASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms