Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC12.58□□□□□ -0.4
HERC2O95714 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.58□□□□□ -0.4
HERC2O95714 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.58□□□□□ -0.4
HERC2O95714 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.58□□□□□ -0.4
HERC2O95714 AL023973.1-201ENST00000624619 620 ntBASIC12.58□□□□□ -0.4
HERC2O95714 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HERC2O95714 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 RPSAP43-201ENST00000402237 625 ntBASIC12.57□□□□□ -0.4
HERC2O95714 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.57□□□□□ -0.4
HERC2O95714 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HERC2O95714 AC106730.1-201ENST00000566722 1090 ntBASIC12.57□□□□□ -0.4
HERC2O95714 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.57□□□□□ -0.4
HERC2O95714 TPSP2-201ENST00000561760 610 ntBASIC12.57□□□□□ -0.4
HERC2O95714 AC092329.2-201ENST00000598402 547 ntBASIC12.57□□□□□ -0.4
HERC2O95714 AL031432.5-201ENST00000641059 760 ntBASIC12.57□□□□□ -0.4
HERC2O95714 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.57□□□□□ -0.4
HERC2O95714 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HERC2O95714 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HERC2O95714 KRT16P4-201ENST00000453883 522 ntBASIC12.57□□□□□ -0.4
HERC2O95714 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.57□□□□□ -0.4
HERC2O95714 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC12.57□□□□□ -0.4
HERC2O95714 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.57□□□□□ -0.4
HERC2O95714 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
HERC2O95714 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.57□□□□□ -0.4
HERC2O95714 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.57□□□□□ -0.4
HERC2O95714 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.57□□□□□ -0.4
HERC2O95714 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HERC2O95714 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HERC2O95714 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.56□□□□□ -0.4
HERC2O95714 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
HERC2O95714 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.56□□□□□ -0.4
HERC2O95714 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.56□□□□□ -0.4
HERC2O95714 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HERC2O95714 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HERC2O95714 THRA-202ENST00000394121 2260 ntTSL 2 BASIC12.56□□□□□ -0.4
HERC2O95714 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HERC2O95714 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HERC2O95714 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.56□□□□□ -0.4
HERC2O95714 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.56□□□□□ -0.4
HERC2O95714 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HERC2O95714 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
HERC2O95714 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
HERC2O95714 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
HERC2O95714 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
HERC2O95714 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
HERC2O95714 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.56□□□□□ -0.4
HERC2O95714 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.56□□□□□ -0.4
HERC2O95714 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HERC2O95714 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HERC2O95714 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
HERC2O95714 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HERC2O95714 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.55□□□□□ -0.4
HERC2O95714 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.55□□□□□ -0.4
HERC2O95714 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HERC2O95714 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HERC2O95714 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC12.55□□□□□ -0.4
HERC2O95714 AC243591.1-201ENST00000452967 1364 ntBASIC12.55□□□□□ -0.4
HERC2O95714 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HERC2O95714 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HERC2O95714 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.55□□□□□ -0.4
HERC2O95714 AC112907.2-201ENST00000448639 330 ntBASIC12.55□□□□□ -0.4
HERC2O95714 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HERC2O95714 AC142381.3-201ENST00000568208 1670 ntBASIC12.55□□□□□ -0.4
HERC2O95714 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HERC2O95714 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.55□□□□□ -0.4
HERC2O95714 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HERC2O95714 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.55□□□□□ -0.4
HERC2O95714 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HERC2O95714 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.55□□□□□ -0.4
HERC2O95714 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HERC2O95714 GCSHP2-201ENST00000560971 527 ntBASIC12.55□□□□□ -0.4
HERC2O95714 AL121912.1-201ENST00000603683 238 ntBASIC12.55□□□□□ -0.4
HERC2O95714 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HERC2O95714 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HERC2O95714 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC12.55□□□□□ -0.4
HERC2O95714 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HERC2O95714 LINC01960-201ENST00000563759 1884 ntBASIC12.55□□□□□ -0.4
HERC2O95714 LINC01311-201ENST00000565162 1445 ntBASIC12.55□□□□□ -0.4
HERC2O95714 CYMP-203ENST00000474680 1263 ntBASIC12.55□□□□□ -0.4
HERC2O95714 PGAM5P1-201ENST00000518923 814 ntBASIC12.55□□□□□ -0.4
HERC2O95714 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
HERC2O95714 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.55□□□□□ -0.4
HERC2O95714 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.55□□□□□ -0.4
HERC2O95714 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HERC2O95714 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms