Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 RN7SL850P-201ENST00000579959 291 ntBASIC31.54■■■□□ 2.64
PCF11O94913 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC31.54■■■□□ 2.64
PCF11O94913 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PCF11O94913 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
PCF11O94913 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PCF11O94913 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PCF11O94913 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PCF11O94913 TMPOP1-202ENST00000424642 1267 ntBASIC31.53■■■□□ 2.64
PCF11O94913 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
PCF11O94913 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC31.53■■■□□ 2.64
PCF11O94913 PNN-205ENST00000556530 601 ntTSL 2 BASIC31.53■■■□□ 2.64
PCF11O94913 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC31.53■■■□□ 2.64
PCF11O94913 AF186192.3-201ENST00000583427 947 ntBASIC31.53■■■□□ 2.64
PCF11O94913 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
PCF11O94913 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC31.53■■■□□ 2.64
PCF11O94913 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PCF11O94913 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PCF11O94913 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PCF11O94913 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
PCF11O94913 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC31.52■■■□□ 2.64
PCF11O94913 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC31.52■■■□□ 2.64
PCF11O94913 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
PCF11O94913 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC31.52■■■□□ 2.64
PCF11O94913 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC31.52■■■□□ 2.64
PCF11O94913 AC005229.4-201ENST00000610085 2198 ntBASIC31.52■■■□□ 2.64
PCF11O94913 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
PCF11O94913 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC31.51■■■□□ 2.64
PCF11O94913 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC31.51■■■□□ 2.64
PCF11O94913 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.64
PCF11O94913 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
PCF11O94913 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PCF11O94913 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
PCF11O94913 FDX2-207ENST00000494368 584 ntTSL 4 BASIC31.51■■■□□ 2.63
PCF11O94913 RPS15-203ENST00000586096 570 ntTSL 2 BASIC31.51■■■□□ 2.63
PCF11O94913 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
PCF11O94913 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PCF11O94913 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC31.5■■■□□ 2.63
PCF11O94913 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
PCF11O94913 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PCF11O94913 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PCF11O94913 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PCF11O94913 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC31.5■■■□□ 2.63
PCF11O94913 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC31.5■■■□□ 2.63
PCF11O94913 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
PCF11O94913 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PCF11O94913 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PCF11O94913 F2R-202ENST00000505600 442 ntTSL 2 BASIC31.49■■■□□ 2.63
PCF11O94913 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC31.49■■■□□ 2.63
PCF11O94913 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PCF11O94913 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PCF11O94913 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
PCF11O94913 HTR7P1-201ENST00000538670 1336 ntBASIC31.49■■■□□ 2.63
PCF11O94913 KRT8P20-201ENST00000423953 1409 ntBASIC31.49■■■□□ 2.63
PCF11O94913 AC026310.3-201ENST00000625186 2373 ntBASIC31.49■■■□□ 2.63
PCF11O94913 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PCF11O94913 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC31.48■■■□□ 2.63
PCF11O94913 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
PCF11O94913 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
PCF11O94913 AC006128.1-201ENST00000624704 1661 ntBASIC31.48■■■□□ 2.63
PCF11O94913 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
PCF11O94913 LINC00565-201ENST00000562710 2331 ntBASIC31.47■■■□□ 2.63
PCF11O94913 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PCF11O94913 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC31.47■■■□□ 2.63
PCF11O94913 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC31.47■■■□□ 2.63
PCF11O94913 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC31.47■■■□□ 2.63
PCF11O94913 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC31.47■■■□□ 2.63
PCF11O94913 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PCF11O94913 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC31.47■■■□□ 2.63
PCF11O94913 AC026471.5-201ENST00000615068 467 ntBASIC31.47■■■□□ 2.63
PCF11O94913 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PCF11O94913 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC31.47■■■□□ 2.63
PCF11O94913 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PCF11O94913 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC31.47■■■□□ 2.63
PCF11O94913 BID-203ENST00000399765 1879 ntTSL 2 BASIC31.47■■■□□ 2.63
PCF11O94913 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PCF11O94913 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC31.47■■■□□ 2.63
PCF11O94913 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PCF11O94913 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
PCF11O94913 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PCF11O94913 AL353807.1-201ENST00000427475 662 ntBASIC31.47■■■□□ 2.63
PCF11O94913 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC31.47■■■□□ 2.63
PCF11O94913 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC31.47■■■□□ 2.63
PCF11O94913 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PCF11O94913 CD177P1-201ENST00000606252 935 ntBASIC31.47■■■□□ 2.63
PCF11O94913 AL353708.3-201ENST00000610272 989 ntBASIC31.47■■■□□ 2.63
PCF11O94913 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC31.46■■■□□ 2.63
PCF11O94913 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PCF11O94913 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
PCF11O94913 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC31.46■■■□□ 2.63
PCF11O94913 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PCF11O94913 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PCF11O94913 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
PCF11O94913 NUDT16P1-203ENST00000513809 620 ntBASIC31.46■■■□□ 2.63
PCF11O94913 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC31.46■■■□□ 2.63
PCF11O94913 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC31.46■■■□□ 2.63
PCF11O94913 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC31.46■■■□□ 2.63
PCF11O94913 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PCF11O94913 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC31.45■■■□□ 2.63
PCF11O94913 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC31.45■■■□□ 2.63
PCF11O94913 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC31.45■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms