Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
KLHL41O60662 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.86■□□□□ 0.77
KLHL41O60662 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
KLHL41O60662 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL41O60662 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
KLHL41O60662 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL41O60662 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL41O60662 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
KLHL41O60662 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL41O60662 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL41O60662 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL41O60662 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.86■□□□□ 0.77
KLHL41O60662 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.86■□□□□ 0.77
KLHL41O60662 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL41O60662 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL41O60662 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL41O60662 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL41O60662 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
KLHL41O60662 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
KLHL41O60662 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
KLHL41O60662 AL355802.2-201ENST00000402069 882 ntBASIC19.85■□□□□ 0.77
KLHL41O60662 MFSD11-216ENST00000590393 1141 ntBASIC19.85■□□□□ 0.77
KLHL41O60662 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.85■□□□□ 0.77
KLHL41O60662 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL41O60662 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL41O60662 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.85■□□□□ 0.77
KLHL41O60662 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.85■□□□□ 0.77
KLHL41O60662 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL41O60662 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.85■□□□□ 0.77
KLHL41O60662 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.84■□□□□ 0.77
KLHL41O60662 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.84■□□□□ 0.77
KLHL41O60662 AL158211.5-201ENST00000623583 2518 ntBASIC19.84■□□□□ 0.77
KLHL41O60662 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL41O60662 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL41O60662 AC125437.2-201ENST00000625180 2167 ntBASIC19.84■□□□□ 0.77
KLHL41O60662 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL41O60662 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL41O60662 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL41O60662 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
KLHL41O60662 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL41O60662 AP001160.3-201ENST00000601484 763 ntBASIC19.84■□□□□ 0.77
KLHL41O60662 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.84■□□□□ 0.77
KLHL41O60662 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL41O60662 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.84■□□□□ 0.77
KLHL41O60662 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL41O60662 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL41O60662 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
KLHL41O60662 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
KLHL41O60662 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.83■□□□□ 0.77
KLHL41O60662 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KLHL41O60662 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
KLHL41O60662 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KLHL41O60662 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KLHL41O60662 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KLHL41O60662 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
KLHL41O60662 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KLHL41O60662 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KLHL41O60662 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
KLHL41O60662 EEF1DP3-203ENST00000566025 782 ntBASIC19.83■□□□□ 0.77
KLHL41O60662 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.83■□□□□ 0.77
KLHL41O60662 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
KLHL41O60662 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.83■□□□□ 0.77
KLHL41O60662 MYCNOS-205ENST00000641950 531 ntBASIC19.83■□□□□ 0.77
KLHL41O60662 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
KLHL41O60662 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL41O60662 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL41O60662 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.83■□□□□ 0.76
KLHL41O60662 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL41O60662 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.83■□□□□ 0.76
KLHL41O60662 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL41O60662 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL41O60662 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL41O60662 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL41O60662 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.82■□□□□ 0.76
KLHL41O60662 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.82■□□□□ 0.76
KLHL41O60662 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.82■□□□□ 0.76
KLHL41O60662 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.82■□□□□ 0.76
KLHL41O60662 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
KLHL41O60662 AC053503.5-201ENST00000601508 636 ntBASIC19.82■□□□□ 0.76
KLHL41O60662 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL41O60662 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
KLHL41O60662 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.81■□□□□ 0.76
KLHL41O60662 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms