Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC016769.1-201ENST00000409132 1010 ntBASIC17.71■□□□□ 0.43
GMDSO60547 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.71■□□□□ 0.43
GMDSO60547 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.71■□□□□ 0.43
GMDSO60547 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.71■□□□□ 0.43
GMDSO60547 AC243732.1-201ENST00000612648 864 ntBASIC17.71■□□□□ 0.43
GMDSO60547 MYCNOS-205ENST00000641950 531 ntBASIC17.71■□□□□ 0.43
GMDSO60547 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.71■□□□□ 0.43
GMDSO60547 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
GMDSO60547 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
GMDSO60547 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.71■□□□□ 0.43
GMDSO60547 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GMDSO60547 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
GMDSO60547 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
GMDSO60547 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.7■□□□□ 0.42
GMDSO60547 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GMDSO60547 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.7■□□□□ 0.42
GMDSO60547 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GMDSO60547 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.7■□□□□ 0.42
GMDSO60547 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.7■□□□□ 0.42
GMDSO60547 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.7■□□□□ 0.42
GMDSO60547 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.7■□□□□ 0.42
GMDSO60547 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.7■□□□□ 0.42
GMDSO60547 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.7■□□□□ 0.42
GMDSO60547 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.7■□□□□ 0.42
GMDSO60547 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GMDSO60547 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.7■□□□□ 0.42
GMDSO60547 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GMDSO60547 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.69■□□□□ 0.42
GMDSO60547 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.69■□□□□ 0.42
GMDSO60547 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
GMDSO60547 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GMDSO60547 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
GMDSO60547 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GMDSO60547 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GMDSO60547 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GMDSO60547 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
GMDSO60547 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
GMDSO60547 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
GMDSO60547 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.68■□□□□ 0.42
GMDSO60547 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.68■□□□□ 0.42
GMDSO60547 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.68■□□□□ 0.42
GMDSO60547 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.68■□□□□ 0.42
GMDSO60547 RBM17P2-201ENST00000616397 1405 ntBASIC17.68■□□□□ 0.42
GMDSO60547 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GMDSO60547 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.68■□□□□ 0.42
GMDSO60547 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.67■□□□□ 0.42
GMDSO60547 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.67■□□□□ 0.42
GMDSO60547 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.67■□□□□ 0.42
GMDSO60547 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GMDSO60547 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
GMDSO60547 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms