Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
PRKNO60260 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRKNO60260 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.69■□□□□ 0.58
PRKNO60260 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PRKNO60260 AC026366.1-201ENST00000488803 879 ntBASIC18.69■□□□□ 0.58
PRKNO60260 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.69■□□□□ 0.58
PRKNO60260 AP003097.1-201ENST00000530657 1135 ntBASIC18.69■□□□□ 0.58
PRKNO60260 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.69■□□□□ 0.58
PRKNO60260 SOX15-203ENST00000570788 1093 ntBASIC18.69■□□□□ 0.58
PRKNO60260 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.69■□□□□ 0.58
PRKNO60260 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRKNO60260 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.69■□□□□ 0.58
PRKNO60260 AC112907.3-201ENST00000577781 2400 ntBASIC18.69■□□□□ 0.58
PRKNO60260 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PRKNO60260 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRKNO60260 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PRKNO60260 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRKNO60260 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.68■□□□□ 0.58
PRKNO60260 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRKNO60260 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRKNO60260 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRKNO60260 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRKNO60260 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRKNO60260 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRKNO60260 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
PRKNO60260 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRKNO60260 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRKNO60260 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.68■□□□□ 0.58
PRKNO60260 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.68■□□□□ 0.58
PRKNO60260 AC006557.6-201ENST00000623071 864 ntBASIC18.68■□□□□ 0.58
PRKNO60260 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.68■□□□□ 0.58
PRKNO60260 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.68■□□□□ 0.58
PRKNO60260 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.68■□□□□ 0.58
PRKNO60260 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRKNO60260 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRKNO60260 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.68■□□□□ 0.58
PRKNO60260 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PRKNO60260 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PRKNO60260 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.68■□□□□ 0.58
PRKNO60260 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PRKNO60260 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.67■□□□□ 0.58
PRKNO60260 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PRKNO60260 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.67■□□□□ 0.58
PRKNO60260 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.67■□□□□ 0.58
PRKNO60260 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.67■□□□□ 0.58
PRKNO60260 UNC93B4-201ENST00000505679 747 ntBASIC18.67■□□□□ 0.58
PRKNO60260 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRKNO60260 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.67■□□□□ 0.58
PRKNO60260 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.67■□□□□ 0.58
PRKNO60260 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.67■□□□□ 0.58
PRKNO60260 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.67■□□□□ 0.58
PRKNO60260 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.66■□□□□ 0.58
PRKNO60260 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.66■□□□□ 0.58
PRKNO60260 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PRKNO60260 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PRKNO60260 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.66■□□□□ 0.58
PRKNO60260 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 AC005829.2-201ENST00000571422 1056 ntBASIC18.66■□□□□ 0.58
PRKNO60260 AC006058.3-201ENST00000606217 1069 ntBASIC18.66■□□□□ 0.58
PRKNO60260 TMEM191A-211ENST00000637163 1067 ntBASIC18.66■□□□□ 0.58
PRKNO60260 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.66■□□□□ 0.58
PRKNO60260 PTBP1P-201ENST00000554374 1601 ntBASIC18.66■□□□□ 0.58
PRKNO60260 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRKNO60260 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKNO60260 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms