Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.33■□□□□ 0.85
SMAD6O43541 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.33■□□□□ 0.85
SMAD6O43541 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.33■□□□□ 0.85
SMAD6O43541 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.33■□□□□ 0.85
SMAD6O43541 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.33■□□□□ 0.84
SMAD6O43541 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMAD6O43541 KRT8P20-201ENST00000423953 1409 ntBASIC20.33■□□□□ 0.84
SMAD6O43541 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
SMAD6O43541 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.32■□□□□ 0.84
SMAD6O43541 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SMAD6O43541 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SMAD6O43541 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SMAD6O43541 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.32■□□□□ 0.84
SMAD6O43541 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.32■□□□□ 0.84
SMAD6O43541 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.32■□□□□ 0.84
SMAD6O43541 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.32■□□□□ 0.84
SMAD6O43541 MTDHP1-201ENST00000605323 784 ntBASIC20.32■□□□□ 0.84
SMAD6O43541 AC066615.1-201ENST00000640911 628 ntBASIC20.32■□□□□ 0.84
SMAD6O43541 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
SMAD6O43541 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD6O43541 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD6O43541 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.31■□□□□ 0.84
SMAD6O43541 AC020907.5-201ENST00000624372 1936 ntBASIC20.31■□□□□ 0.84
SMAD6O43541 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SMAD6O43541 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD6O43541 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD6O43541 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD6O43541 HLA-G-202ENST00000376815 851 ntBASIC20.31■□□□□ 0.84
SMAD6O43541 HLA-G-203ENST00000376818 1127 ntBASIC20.31■□□□□ 0.84
SMAD6O43541 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SMAD6O43541 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD6O43541 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.31■□□□□ 0.84
SMAD6O43541 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD6O43541 AL359736.2-201ENST00000621992 437 ntBASIC20.31■□□□□ 0.84
SMAD6O43541 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
SMAD6O43541 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD6O43541 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD6O43541 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.3■□□□□ 0.84
SMAD6O43541 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.3■□□□□ 0.84
SMAD6O43541 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD6O43541 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.3■□□□□ 0.84
SMAD6O43541 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.3■□□□□ 0.84
SMAD6O43541 RPPH1-201ENST00000516869 333 ntBASIC20.3■□□□□ 0.84
SMAD6O43541 C1QBPP2-201ENST00000528754 825 ntBASIC20.3■□□□□ 0.84
SMAD6O43541 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.3■□□□□ 0.84
SMAD6O43541 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SMAD6O43541 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD6O43541 FEM1AP1-201ENST00000431297 1995 ntBASIC20.3■□□□□ 0.84
SMAD6O43541 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD6O43541 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMAD6O43541 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMAD6O43541 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SMAD6O43541 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD6O43541 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SMAD6O43541 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD6O43541 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SMAD6O43541 AC092667.1-201ENST00000434301 2586 ntBASIC20.29■□□□□ 0.84
SMAD6O43541 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD6O43541 AP005212.1-201ENST00000581547 1997 ntBASIC20.29■□□□□ 0.84
SMAD6O43541 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD6O43541 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD6O43541 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.29■□□□□ 0.84
SMAD6O43541 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD6O43541 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.29■□□□□ 0.84
SMAD6O43541 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.29■□□□□ 0.84
SMAD6O43541 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SMAD6O43541 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD6O43541 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMAD6O43541 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.29■□□□□ 0.84
SMAD6O43541 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD6O43541 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD6O43541 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD6O43541 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD6O43541 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.28■□□□□ 0.84
SMAD6O43541 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD6O43541 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD6O43541 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
SMAD6O43541 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.28■□□□□ 0.84
SMAD6O43541 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD6O43541 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.28■□□□□ 0.84
SMAD6O43541 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD6O43541 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD6O43541 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMAD6O43541 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms