Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.87■□□□□ 0.93
MSI1O43347 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.87■□□□□ 0.93
MSI1O43347 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSI1O43347 PRORSD1P-201ENST00000295112 541 ntBASIC20.87■□□□□ 0.93
MSI1O43347 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSI1O43347 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
MSI1O43347 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSI1O43347 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.87■□□□□ 0.93
MSI1O43347 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.87■□□□□ 0.93
MSI1O43347 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.87■□□□□ 0.93
MSI1O43347 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSI1O43347 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.87■□□□□ 0.93
MSI1O43347 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.87■□□□□ 0.93
MSI1O43347 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.87■□□□□ 0.93
MSI1O43347 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
MSI1O43347 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
MSI1O43347 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSI1O43347 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSI1O43347 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.87■□□□□ 0.93
MSI1O43347 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSI1O43347 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSI1O43347 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSI1O43347 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
MSI1O43347 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.86■□□□□ 0.93
MSI1O43347 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.86■□□□□ 0.93
MSI1O43347 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.86■□□□□ 0.93
MSI1O43347 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.86■□□□□ 0.93
MSI1O43347 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.86■□□□□ 0.93
MSI1O43347 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSI1O43347 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 AC124283.5-201ENST00000624661 1809 ntBASIC20.85■□□□□ 0.93
MSI1O43347 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.85■□□□□ 0.93
MSI1O43347 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.85■□□□□ 0.93
MSI1O43347 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.85■□□□□ 0.93
MSI1O43347 AL031963.3-201ENST00000606441 850 ntBASIC20.85■□□□□ 0.93
MSI1O43347 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.85■□□□□ 0.93
MSI1O43347 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.85■□□□□ 0.93
MSI1O43347 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MSI1O43347 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSI1O43347 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.84■□□□□ 0.93
MSI1O43347 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSI1O43347 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.84■□□□□ 0.93
MSI1O43347 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MSI1O43347 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSI1O43347 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSI1O43347 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.84■□□□□ 0.93
MSI1O43347 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSI1O43347 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSI1O43347 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.84■□□□□ 0.93
MSI1O43347 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.84■□□□□ 0.93
MSI1O43347 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MSI1O43347 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
MSI1O43347 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSI1O43347 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.84■□□□□ 0.93
MSI1O43347 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.84■□□□□ 0.93
MSI1O43347 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSI1O43347 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MSI1O43347 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
MSI1O43347 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MSI1O43347 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
MSI1O43347 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MSI1O43347 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
MSI1O43347 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
MSI1O43347 POM121L13P-201ENST00000422362 380 ntBASIC20.83■□□□□ 0.93
MSI1O43347 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.83■□□□□ 0.93
MSI1O43347 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.83■□□□□ 0.93
MSI1O43347 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
MSI1O43347 AC069544.1-201ENST00000609399 999 ntBASIC20.83■□□□□ 0.93
MSI1O43347 AC120498.8-201ENST00000614275 531 ntBASIC20.83■□□□□ 0.93
MSI1O43347 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MSI1O43347 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
MSI1O43347 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MSI1O43347 KRT8P20-201ENST00000423953 1409 ntBASIC20.83■□□□□ 0.93
MSI1O43347 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
MSI1O43347 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MSI1O43347 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms