Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF1O43189 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF1O43189 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.28■□□□□ 0.36
PHF1O43189 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.28■□□□□ 0.36
PHF1O43189 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
PHF1O43189 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF1O43189 AC069236.1-201ENST00000604339 616 ntBASIC17.28■□□□□ 0.36
PHF1O43189 AL591742.1-201ENST00000604433 565 ntBASIC17.28■□□□□ 0.36
PHF1O43189 AC016405.3-201ENST00000607710 860 ntBASIC17.28■□□□□ 0.36
PHF1O43189 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHF1O43189 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF1O43189 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.28■□□□□ 0.36
PHF1O43189 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHF1O43189 AIRN-201ENST00000601203 4374 ntBASIC17.28■□□□□ 0.36
PHF1O43189 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF1O43189 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.28■□□□□ 0.36
PHF1O43189 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF1O43189 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF1O43189 AC007952.6-201ENST00000573168 2673 ntBASIC17.27■□□□□ 0.36
PHF1O43189 AC003957.1-201ENST00000625108 2673 ntBASIC17.27■□□□□ 0.36
PHF1O43189 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.27■□□□□ 0.36
PHF1O43189 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHF1O43189 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHF1O43189 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PHF1O43189 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHF1O43189 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.27■□□□□ 0.36
PHF1O43189 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHF1O43189 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.27■□□□□ 0.36
PHF1O43189 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.27■□□□□ 0.36
PHF1O43189 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.27■□□□□ 0.36
PHF1O43189 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.27■□□□□ 0.36
PHF1O43189 AC243732.1-201ENST00000612648 864 ntBASIC17.27■□□□□ 0.36
PHF1O43189 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PHF1O43189 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHF1O43189 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHF1O43189 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHF1O43189 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.27■□□□□ 0.35
PHF1O43189 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PHF1O43189 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHF1O43189 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.27■□□□□ 0.35
PHF1O43189 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHF1O43189 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.27■□□□□ 0.35
PHF1O43189 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHF1O43189 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHF1O43189 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PHF1O43189 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PHF1O43189 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PHF1O43189 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.26■□□□□ 0.35
PHF1O43189 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.26■□□□□ 0.35
PHF1O43189 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.26■□□□□ 0.35
PHF1O43189 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PHF1O43189 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.26■□□□□ 0.35
PHF1O43189 AC093787.1-201ENST00000450396 207 ntBASIC17.26■□□□□ 0.35
PHF1O43189 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PHF1O43189 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.26■□□□□ 0.35
PHF1O43189 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.26■□□□□ 0.35
PHF1O43189 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.26■□□□□ 0.35
PHF1O43189 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 AC083880.1-201ENST00000608266 535 ntBASIC17.26■□□□□ 0.35
PHF1O43189 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.26■□□□□ 0.35
PHF1O43189 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.26■□□□□ 0.35
PHF1O43189 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.26■□□□□ 0.35
PHF1O43189 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PHF1O43189 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.26■□□□□ 0.35
PHF1O43189 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PHF1O43189 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHF1O43189 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.25■□□□□ 0.35
PHF1O43189 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.25■□□□□ 0.35
PHF1O43189 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.25■□□□□ 0.35
PHF1O43189 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.25■□□□□ 0.35
PHF1O43189 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PHF1O43189 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.25■□□□□ 0.35
PHF1O43189 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PHF1O43189 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.25■□□□□ 0.35
PHF1O43189 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PHF1O43189 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 AC008550.1-201ENST00000511500 884 ntBASIC17.25■□□□□ 0.35
PHF1O43189 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms