Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPTLC1O15269 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPTLC1O15269 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPTLC1O15269 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SPTLC1O15269 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
SPTLC1O15269 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.51■■□□□ 1.03
SPTLC1O15269 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.51■■□□□ 1.03
SPTLC1O15269 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
SPTLC1O15269 AL359736.2-201ENST00000621992 437 ntBASIC21.51■■□□□ 1.03
SPTLC1O15269 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SPTLC1O15269 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPTLC1O15269 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPTLC1O15269 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPTLC1O15269 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.51■■□□□ 1.03
SPTLC1O15269 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SPTLC1O15269 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPTLC1O15269 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SPTLC1O15269 AC092720.2-201ENST00000602388 1665 ntBASIC21.5■■□□□ 1.03
SPTLC1O15269 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.5■■□□□ 1.03
SPTLC1O15269 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.5■■□□□ 1.03
SPTLC1O15269 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPTLC1O15269 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SPTLC1O15269 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.5■■□□□ 1.03
SPTLC1O15269 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SPTLC1O15269 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SPTLC1O15269 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.5■■□□□ 1.03
SPTLC1O15269 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.5■■□□□ 1.03
SPTLC1O15269 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPTLC1O15269 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPTLC1O15269 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.5■■□□□ 1.03
SPTLC1O15269 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SPTLC1O15269 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SPTLC1O15269 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPTLC1O15269 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPTLC1O15269 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.49■■□□□ 1.03
SPTLC1O15269 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPTLC1O15269 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SPTLC1O15269 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.49■■□□□ 1.03
SPTLC1O15269 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.49■■□□□ 1.03
SPTLC1O15269 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.49■■□□□ 1.03
SPTLC1O15269 RPPH1-201ENST00000516869 333 ntBASIC21.49■■□□□ 1.03
SPTLC1O15269 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.49■■□□□ 1.03
SPTLC1O15269 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.49■■□□□ 1.03
SPTLC1O15269 MTDHP1-201ENST00000605323 784 ntBASIC21.49■■□□□ 1.03
SPTLC1O15269 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
SPTLC1O15269 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.49■■□□□ 1.03
SPTLC1O15269 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPTLC1O15269 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
SPTLC1O15269 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPTLC1O15269 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SPTLC1O15269 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SPTLC1O15269 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SPTLC1O15269 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.48■■□□□ 1.03
SPTLC1O15269 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SPTLC1O15269 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.48■■□□□ 1.03
SPTLC1O15269 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.48■■□□□ 1.03
SPTLC1O15269 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.48■■□□□ 1.03
SPTLC1O15269 C1QBPP2-201ENST00000528754 825 ntBASIC21.48■■□□□ 1.03
SPTLC1O15269 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.48■■□□□ 1.03
SPTLC1O15269 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.48■■□□□ 1.03
SPTLC1O15269 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.48■■□□□ 1.03
SPTLC1O15269 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SPTLC1O15269 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SPTLC1O15269 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SPTLC1O15269 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SPTLC1O15269 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.47■■□□□ 1.03
SPTLC1O15269 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.47■■□□□ 1.03
SPTLC1O15269 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SPTLC1O15269 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.47■■□□□ 1.03
SPTLC1O15269 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SPTLC1O15269 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SPTLC1O15269 AC008550.1-201ENST00000511500 884 ntBASIC21.47■■□□□ 1.03
SPTLC1O15269 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.47■■□□□ 1.03
SPTLC1O15269 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.47■■□□□ 1.03
SPTLC1O15269 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SPTLC1O15269 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SPTLC1O15269 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SPTLC1O15269 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SPTLC1O15269 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.47■■□□□ 1.03
SPTLC1O15269 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SPTLC1O15269 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
SPTLC1O15269 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.46■■□□□ 1.03
SPTLC1O15269 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SPTLC1O15269 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.46■■□□□ 1.03
SPTLC1O15269 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SPTLC1O15269 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPTLC1O15269 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.46■■□□□ 1.03
SPTLC1O15269 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPTLC1O15269 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPTLC1O15269 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.46■■□□□ 1.03
SPTLC1O15269 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SPTLC1O15269 AL031963.3-201ENST00000606441 850 ntBASIC21.46■■□□□ 1.03
SPTLC1O15269 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SPTLC1O15269 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SPTLC1O15269 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SPTLC1O15269 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.46■■□□□ 1.03
SPTLC1O15269 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPTLC1O15269 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPTLC1O15269 KRT8P17-201ENST00000453110 1448 ntBASIC21.46■■□□□ 1.03
SPTLC1O15269 SMG8-203ENST00000578922 2178 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms