Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CHD1O14646 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CHD1O14646 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC32.89■■■□□ 2.86
CHD1O14646 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC32.89■■■□□ 2.86
CHD1O14646 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC32.89■■■□□ 2.86
CHD1O14646 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CHD1O14646 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CHD1O14646 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC32.89■■■□□ 2.85
CHD1O14646 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC32.88■■■□□ 2.85
CHD1O14646 NDUFV2-AS1-203ENST00000608008 779 ntBASIC32.88■■■□□ 2.85
CHD1O14646 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CHD1O14646 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC32.88■■■□□ 2.85
CHD1O14646 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC32.88■■■□□ 2.85
CHD1O14646 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
CHD1O14646 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHD1O14646 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC32.87■■■□□ 2.85
CHD1O14646 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHD1O14646 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC32.87■■■□□ 2.85
CHD1O14646 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC32.87■■■□□ 2.85
CHD1O14646 FDX1P1-201ENST00000449115 551 ntBASIC32.87■■■□□ 2.85
CHD1O14646 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHD1O14646 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC32.87■■■□□ 2.85
CHD1O14646 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHD1O14646 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHD1O14646 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CHD1O14646 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CHD1O14646 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CHD1O14646 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC32.86■■■□□ 2.85
CHD1O14646 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC32.86■■■□□ 2.85
CHD1O14646 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CHD1O14646 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC32.86■■■□□ 2.85
CHD1O14646 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC32.85■■■□□ 2.85
CHD1O14646 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CHD1O14646 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CHD1O14646 AC141257.4-201ENST00000634557 245 ntBASIC32.85■■■□□ 2.85
CHD1O14646 AC136944.6-201ENST00000634818 245 ntBASIC32.85■■■□□ 2.85
CHD1O14646 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CHD1O14646 AC004980.1-204ENST00000429707 299 ntBASIC32.85■■■□□ 2.85
CHD1O14646 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC32.85■■■□□ 2.85
CHD1O14646 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC32.85■■■□□ 2.85
CHD1O14646 AC130371.2-201ENST00000619443 611 ntBASIC32.85■■■□□ 2.85
CHD1O14646 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC32.84■■■□□ 2.85
CHD1O14646 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CHD1O14646 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC32.84■■■□□ 2.85
CHD1O14646 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC32.84■■■□□ 2.85
CHD1O14646 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CHD1O14646 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC32.84■■■□□ 2.85
CHD1O14646 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC32.84■■■□□ 2.85
CHD1O14646 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CHD1O14646 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CHD1O14646 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CHD1O14646 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC32.84■■■□□ 2.85
CHD1O14646 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC32.84■■■□□ 2.85
CHD1O14646 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CHD1O14646 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC32.84■■■□□ 2.85
CHD1O14646 KRT8P10-201ENST00000450021 1447 ntBASIC32.83■■■□□ 2.85
CHD1O14646 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC32.83■■■□□ 2.85
CHD1O14646 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
CHD1O14646 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC32.83■■■□□ 2.85
CHD1O14646 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC32.83■■■□□ 2.85
CHD1O14646 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC32.83■■■□□ 2.85
CHD1O14646 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC32.83■■■□□ 2.85
CHD1O14646 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC32.82■■■□□ 2.85
CHD1O14646 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC32.82■■■□□ 2.85
CHD1O14646 KLK8-205ENST00000593490 267 ntTSL 3 BASIC32.82■■■□□ 2.85
CHD1O14646 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
CHD1O14646 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CHD1O14646 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC32.82■■■□□ 2.84
CHD1O14646 GPX4-207ENST00000589115 812 ntTSL 2 BASIC32.82■■■□□ 2.84
CHD1O14646 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC32.82■■■□□ 2.84
CHD1O14646 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CHD1O14646 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC32.82■■■□□ 2.84
CHD1O14646 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CHD1O14646 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CHD1O14646 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC32.81■■■□□ 2.84
CHD1O14646 AC007663.1-201ENST00000438948 1240 ntBASIC32.81■■■□□ 2.84
CHD1O14646 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
CHD1O14646 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CHD1O14646 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC32.81■■■□□ 2.84
CHD1O14646 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC32.81■■■□□ 2.84
CHD1O14646 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CHD1O14646 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
CHD1O14646 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CHD1O14646 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
CHD1O14646 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
CHD1O14646 KRT18P38-201ENST00000449496 1282 ntBASIC32.8■■■□□ 2.84
CHD1O14646 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
CHD1O14646 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC32.8■■■□□ 2.84
CHD1O14646 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC32.8■■■□□ 2.84
CHD1O14646 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CHD1O14646 PTBP1P-201ENST00000554374 1601 ntBASIC32.8■■■□□ 2.84
CHD1O14646 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC32.8■■■□□ 2.84
CHD1O14646 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CHD1O14646 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CHD1O14646 DAP-202ENST00000432074 1048 ntTSL 2 BASIC32.8■■■□□ 2.84
CHD1O14646 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC32.8■■■□□ 2.84
CHD1O14646 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC32.8■■■□□ 2.84
CHD1O14646 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CHD1O14646 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC32.79■■■□□ 2.84
CHD1O14646 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms