Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.55■■□□□ 1.04
SOX1O00570 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOX1O00570 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.55■■□□□ 1.04
SOX1O00570 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.55■■□□□ 1.04
SOX1O00570 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.55■■□□□ 1.04
SOX1O00570 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.55■■□□□ 1.04
SOX1O00570 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.55■■□□□ 1.04
SOX1O00570 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOX1O00570 AC020928.2-201ENST00000588717 2197 ntBASIC21.55■■□□□ 1.04
SOX1O00570 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SOX1O00570 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SOX1O00570 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOX1O00570 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SOX1O00570 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOX1O00570 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SOX1O00570 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SOX1O00570 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SOX1O00570 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.54■■□□□ 1.04
SOX1O00570 AL136038.3-201ENST00000561909 1096 ntBASIC21.54■■□□□ 1.04
SOX1O00570 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.54■■□□□ 1.04
SOX1O00570 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.54■■□□□ 1.04
SOX1O00570 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.54■■□□□ 1.04
SOX1O00570 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.54■■□□□ 1.04
SOX1O00570 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SOX1O00570 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SOX1O00570 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.54■■□□□ 1.04
SOX1O00570 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.53■■□□□ 1.04
SOX1O00570 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.53■■□□□ 1.04
SOX1O00570 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SOX1O00570 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOX1O00570 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOX1O00570 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.53■■□□□ 1.04
SOX1O00570 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.53■■□□□ 1.04
SOX1O00570 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.53■■□□□ 1.04
SOX1O00570 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.53■■□□□ 1.04
SOX1O00570 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.53■■□□□ 1.04
SOX1O00570 CKBP1-201ENST00000565489 1086 ntBASIC21.53■■□□□ 1.04
SOX1O00570 AL441883.1-201ENST00000566170 1045 ntBASIC21.53■■□□□ 1.04
SOX1O00570 PRELID1P1-202ENST00000567272 903 ntBASIC21.53■■□□□ 1.04
SOX1O00570 AC111152.3-201ENST00000569699 673 ntBASIC21.53■■□□□ 1.04
SOX1O00570 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
SOX1O00570 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SOX1O00570 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.53■■□□□ 1.04
SOX1O00570 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOX1O00570 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.53■■□□□ 1.04
SOX1O00570 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SOX1O00570 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.52■■□□□ 1.04
SOX1O00570 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SOX1O00570 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SOX1O00570 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SOX1O00570 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SOX1O00570 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SOX1O00570 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.52■■□□□ 1.04
SOX1O00570 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
SOX1O00570 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SOX1O00570 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.52■■□□□ 1.04
SOX1O00570 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.52■■□□□ 1.04
SOX1O00570 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.52■■□□□ 1.04
SOX1O00570 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.52■■□□□ 1.04
SOX1O00570 AC116562.4-202ENST00000641738 218 ntBASIC21.52■■□□□ 1.04
SOX1O00570 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SOX1O00570 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SOX1O00570 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SOX1O00570 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SOX1O00570 AC026471.6-201ENST00000622954 1905 ntBASIC21.51■■□□□ 1.03
SOX1O00570 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.51■■□□□ 1.03
SOX1O00570 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SOX1O00570 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SOX1O00570 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SOX1O00570 FAAHP1-202ENST00000446499 1238 ntBASIC21.51■■□□□ 1.03
SOX1O00570 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.51■■□□□ 1.03
SOX1O00570 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SOX1O00570 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SOX1O00570 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.51■■□□□ 1.03
SOX1O00570 AC092119.3-201ENST00000612618 583 ntBASIC21.51■■□□□ 1.03
SOX1O00570 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SOX1O00570 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SOX1O00570 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SOX1O00570 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.51■■□□□ 1.03
SOX1O00570 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SOX1O00570 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
SOX1O00570 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.5■■□□□ 1.03
SOX1O00570 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SOX1O00570 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SOX1O00570 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.5■■□□□ 1.03
SOX1O00570 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.5■■□□□ 1.03
SOX1O00570 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SOX1O00570 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SOX1O00570 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.5■■□□□ 1.03
SOX1O00570 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
SOX1O00570 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.5■■□□□ 1.03
SOX1O00570 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.5■■□□□ 1.03
SOX1O00570 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.5■■□□□ 1.03
SOX1O00570 PRSS44-201ENST00000515154 1146 ntBASIC21.5■■□□□ 1.03
SOX1O00570 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.5■■□□□ 1.03
SOX1O00570 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.5■■□□□ 1.03
SOX1O00570 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.5■■□□□ 1.03
SOX1O00570 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SOX1O00570 NPAP1P7-201ENST00000613027 823 ntBASIC21.5■■□□□ 1.03
SOX1O00570 AL023973.1-201ENST00000624619 620 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms