Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 KRT17P3-201ENST00000420566 1262 ntBASIC21.22■□□□□ 0.99
CLDN5O00501 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLDN5O00501 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.22■□□□□ 0.99
CLDN5O00501 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN5O00501 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
CLDN5O00501 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.22■□□□□ 0.99
CLDN5O00501 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN5O00501 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.22■□□□□ 0.99
CLDN5O00501 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.22■□□□□ 0.99
CLDN5O00501 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN5O00501 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLDN5O00501 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN5O00501 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN5O00501 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN5O00501 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN5O00501 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN5O00501 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN5O00501 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CLDN5O00501 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN5O00501 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CLDN5O00501 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN5O00501 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN5O00501 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.21■□□□□ 0.99
CLDN5O00501 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.21■□□□□ 0.99
CLDN5O00501 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN5O00501 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.21■□□□□ 0.99
CLDN5O00501 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN5O00501 AL031963.3-201ENST00000606441 850 ntBASIC21.21■□□□□ 0.99
CLDN5O00501 AC069544.1-201ENST00000609399 999 ntBASIC21.21■□□□□ 0.99
CLDN5O00501 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN5O00501 AP005212.1-201ENST00000581547 1997 ntBASIC21.21■□□□□ 0.99
CLDN5O00501 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN5O00501 KRT8P17-201ENST00000453110 1448 ntBASIC21.21■□□□□ 0.99
CLDN5O00501 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN5O00501 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN5O00501 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDN5O00501 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CLDN5O00501 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CLDN5O00501 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.2■□□□□ 0.98
CLDN5O00501 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN5O00501 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDN5O00501 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN5O00501 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.2■□□□□ 0.98
CLDN5O00501 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN5O00501 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN5O00501 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN5O00501 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CLDN5O00501 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN5O00501 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CLDN5O00501 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CLDN5O00501 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN5O00501 KRT8P20-201ENST00000423953 1409 ntBASIC21.2■□□□□ 0.98
CLDN5O00501 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN5O00501 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN5O00501 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN5O00501 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN5O00501 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.19■□□□□ 0.98
CLDN5O00501 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN5O00501 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN5O00501 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CLDN5O00501 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN5O00501 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN5O00501 RPS2P52-201ENST00000469610 820 ntBASIC21.19■□□□□ 0.98
CLDN5O00501 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN5O00501 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CLDN5O00501 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.19■□□□□ 0.98
CLDN5O00501 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN5O00501 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.19■□□□□ 0.98
CLDN5O00501 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN5O00501 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN5O00501 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN5O00501 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN5O00501 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN5O00501 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.18■□□□□ 0.98
CLDN5O00501 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN5O00501 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.18■□□□□ 0.98
CLDN5O00501 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN5O00501 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.18■□□□□ 0.98
CLDN5O00501 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CLDN5O00501 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN5O00501 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.18■□□□□ 0.98
CLDN5O00501 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN5O00501 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN5O00501 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CLDN5O00501 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN5O00501 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN5O00501 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN5O00501 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN5O00501 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN5O00501 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN5O00501 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN5O00501 HLA-G-202ENST00000376815 851 ntBASIC21.17■□□□□ 0.98
CLDN5O00501 HLA-G-203ENST00000376818 1127 ntBASIC21.17■□□□□ 0.98
CLDN5O00501 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CLDN5O00501 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.17■□□□□ 0.98
CLDN5O00501 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN5O00501 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.17■□□□□ 0.98
CLDN5O00501 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.17■□□□□ 0.98
CLDN5O00501 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.17■□□□□ 0.98
CLDN5O00501 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms