Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTCAO00442 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTCAO00442 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTCAO00442 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTCAO00442 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTCAO00442 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTCAO00442 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RTCAO00442 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
RTCAO00442 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.16■□□□□ 0.66
RTCAO00442 C2orf69P4-201ENST00000565394 541 ntBASIC19.16■□□□□ 0.66
RTCAO00442 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.16■□□□□ 0.66
RTCAO00442 AL109923.1-201ENST00000618799 583 ntBASIC19.16■□□□□ 0.66
RTCAO00442 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTCAO00442 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.16■□□□□ 0.66
RTCAO00442 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.16■□□□□ 0.66
RTCAO00442 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTCAO00442 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTCAO00442 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTCAO00442 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.16■□□□□ 0.66
RTCAO00442 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.16■□□□□ 0.66
RTCAO00442 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.16■□□□□ 0.66
RTCAO00442 PTBP1P-201ENST00000554374 1601 ntBASIC19.15■□□□□ 0.66
RTCAO00442 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
RTCAO00442 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
RTCAO00442 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTCAO00442 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTCAO00442 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTCAO00442 AL138781.1-201ENST00000566567 1274 ntBASIC19.15■□□□□ 0.66
RTCAO00442 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RTCAO00442 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.15■□□□□ 0.66
RTCAO00442 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.15■□□□□ 0.66
RTCAO00442 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.15■□□□□ 0.66
RTCAO00442 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RTCAO00442 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.15■□□□□ 0.66
RTCAO00442 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.15■□□□□ 0.66
RTCAO00442 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTCAO00442 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.15■□□□□ 0.66
RTCAO00442 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.15■□□□□ 0.66
RTCAO00442 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
RTCAO00442 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.14■□□□□ 0.66
RTCAO00442 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.14■□□□□ 0.65
RTCAO00442 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
RTCAO00442 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RTCAO00442 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTCAO00442 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTCAO00442 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTCAO00442 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTCAO00442 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTCAO00442 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.14■□□□□ 0.65
RTCAO00442 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RTCAO00442 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.13■□□□□ 0.65
RTCAO00442 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.13■□□□□ 0.65
RTCAO00442 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.13■□□□□ 0.65
RTCAO00442 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RTCAO00442 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTCAO00442 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTCAO00442 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTCAO00442 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RTCAO00442 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.13■□□□□ 0.65
RTCAO00442 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.13■□□□□ 0.65
RTCAO00442 DUSP5P2-201ENST00000426873 1033 ntBASIC19.13■□□□□ 0.65
RTCAO00442 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.13■□□□□ 0.65
RTCAO00442 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTCAO00442 AC098934.4-201ENST00000564127 592 ntBASIC19.13■□□□□ 0.65
RTCAO00442 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.13■□□□□ 0.65
RTCAO00442 AC104771.1-201ENST00000603335 964 ntBASIC19.13■□□□□ 0.65
RTCAO00442 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RTCAO00442 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.13■□□□□ 0.65
RTCAO00442 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RTCAO00442 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.13■□□□□ 0.65
RTCAO00442 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTCAO00442 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.13■□□□□ 0.65
RTCAO00442 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTCAO00442 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTCAO00442 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTCAO00442 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTCAO00442 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTCAO00442 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RTCAO00442 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTCAO00442 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RTCAO00442 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RTCAO00442 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.12■□□□□ 0.65
RTCAO00442 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RTCAO00442 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.12■□□□□ 0.65
RTCAO00442 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RTCAO00442 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.12■□□□□ 0.65
RTCAO00442 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.12■□□□□ 0.65
RTCAO00442 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RTCAO00442 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.12■□□□□ 0.65
RTCAO00442 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
RTCAO00442 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms