Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.92■□□□□ 0.62
CLIC1O00299 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.92■□□□□ 0.62
CLIC1O00299 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLIC1O00299 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLIC1O00299 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CLIC1O00299 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.92■□□□□ 0.62
CLIC1O00299 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLIC1O00299 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC1O00299 AC087289.5-201ENST00000586076 3175 ntBASIC18.91■□□□□ 0.62
CLIC1O00299 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC1O00299 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLIC1O00299 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC1O00299 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC1O00299 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC1O00299 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.91■□□□□ 0.62
CLIC1O00299 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CLIC1O00299 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.91■□□□□ 0.62
CLIC1O00299 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIC1O00299 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC1O00299 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC1O00299 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLIC1O00299 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLIC1O00299 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC1O00299 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC1O00299 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC1O00299 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLIC1O00299 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIC1O00299 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.91■□□□□ 0.62
CLIC1O00299 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC1O00299 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC1O00299 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC1O00299 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC1O00299 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC1O00299 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC1O00299 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLIC1O00299 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLIC1O00299 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC1O00299 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLIC1O00299 ZNRF2P3-201ENST00000424200 374 ntBASIC18.9■□□□□ 0.62
CLIC1O00299 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.9■□□□□ 0.62
CLIC1O00299 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.9■□□□□ 0.62
CLIC1O00299 AL591742.1-201ENST00000604433 565 ntBASIC18.9■□□□□ 0.62
CLIC1O00299 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC1O00299 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC1O00299 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
CLIC1O00299 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
CLIC1O00299 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.9■□□□□ 0.62
CLIC1O00299 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.9■□□□□ 0.62
CLIC1O00299 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLIC1O00299 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLIC1O00299 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLIC1O00299 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLIC1O00299 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.89■□□□□ 0.62
CLIC1O00299 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CLIC1O00299 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.89■□□□□ 0.61
CLIC1O00299 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CLIC1O00299 TERF1P5-201ENST00000477545 1207 ntBASIC18.89■□□□□ 0.61
CLIC1O00299 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.89■□□□□ 0.61
CLIC1O00299 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLIC1O00299 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.89■□□□□ 0.61
CLIC1O00299 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.89■□□□□ 0.61
CLIC1O00299 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.89■□□□□ 0.61
CLIC1O00299 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLIC1O00299 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLIC1O00299 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC1O00299 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIC1O00299 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC1O00299 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC1O00299 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLIC1O00299 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC1O00299 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC1O00299 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIC1O00299 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CLIC1O00299 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.88■□□□□ 0.61
CLIC1O00299 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC1O00299 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLIC1O00299 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms