Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
C4orf47A7E2U8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 FAM99A-202ENST00000538190 1989 ntBASIC19.71■□□□□ 0.75
C4orf47A7E2U8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
C4orf47A7E2U8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 CR392000.1-201ENST00000624770 1228 ntBASIC19.7■□□□□ 0.74
C4orf47A7E2U8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.7■□□□□ 0.74
C4orf47A7E2U8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C4orf47A7E2U8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 LIN28AP1-201ENST00000429574 405 ntBASIC19.69■□□□□ 0.74
C4orf47A7E2U8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 AC116562.2-201ENST00000507042 360 ntBASIC19.69■□□□□ 0.74
C4orf47A7E2U8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
C4orf47A7E2U8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 ATP5G1P1-201ENST00000448724 379 ntBASIC19.68■□□□□ 0.74
C4orf47A7E2U8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 AC010203.1-204ENST00000548782 407 ntBASIC19.68■□□□□ 0.74
C4orf47A7E2U8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
C4orf47A7E2U8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms