Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC22.47■■□□□ 1.19
SPDYE4A6NLX3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SPDYE4A6NLX3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SPDYE4A6NLX3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.47■■□□□ 1.19
SPDYE4A6NLX3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SPDYE4A6NLX3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 MIPEPP3-201ENST00000412105 444 ntBASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 AC068338.2-201ENST00000563278 1430 ntBASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SPDYE4A6NLX3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SPDYE4A6NLX3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
SPDYE4A6NLX3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 POU5F1P3-201ENST00000428824 1078 ntBASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 AC093827.2-201ENST00000512654 315 ntBASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 AC053503.5-201ENST00000601508 636 ntBASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 AP006587.3-201ENST00000525742 1516 ntBASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 GABARAPL3-202ENST00000624044 1851 ntBASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPDYE4A6NLX3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 SLC7A5P1-201ENST00000568957 537 ntBASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SPDYE4A6NLX3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 AC016405.3-201ENST00000607710 860 ntBASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 OR10C1-204ENST00000622521 1039 ntBASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SPDYE4A6NLX3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms