Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TVP23AA6NH52 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.9■□□□□ 0.46
TVP23AA6NH52 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TVP23AA6NH52 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.9■□□□□ 0.46
TVP23AA6NH52 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.9■□□□□ 0.46
TVP23AA6NH52 AC087623.3-201ENST00000607047 1098 ntBASIC17.9■□□□□ 0.46
TVP23AA6NH52 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.9■□□□□ 0.46
TVP23AA6NH52 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TVP23AA6NH52 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.9■□□□□ 0.46
TVP23AA6NH52 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.9■□□□□ 0.46
TVP23AA6NH52 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TVP23AA6NH52 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TVP23AA6NH52 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TVP23AA6NH52 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TVP23AA6NH52 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 AC097381.1-201ENST00000429019 1296 ntBASIC17.89■□□□□ 0.45
TVP23AA6NH52 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TVP23AA6NH52 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TVP23AA6NH52 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 AL691432.2-201ENST00000607222 2038 ntBASIC17.88■□□□□ 0.45
TVP23AA6NH52 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 AL591742.1-201ENST00000604433 565 ntBASIC17.88■□□□□ 0.45
TVP23AA6NH52 AL356652.1-201ENST00000615962 565 ntBASIC17.88■□□□□ 0.45
TVP23AA6NH52 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 AC125437.2-201ENST00000625180 2167 ntBASIC17.88■□□□□ 0.45
TVP23AA6NH52 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TVP23AA6NH52 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.88■□□□□ 0.45
TVP23AA6NH52 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TVP23AA6NH52 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.87■□□□□ 0.45
TVP23AA6NH52 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TVP23AA6NH52 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TVP23AA6NH52 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TVP23AA6NH52 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TVP23AA6NH52 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.87■□□□□ 0.45
TVP23AA6NH52 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.87■□□□□ 0.45
TVP23AA6NH52 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TVP23AA6NH52 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TVP23AA6NH52 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.87■□□□□ 0.45
TVP23AA6NH52 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.87■□□□□ 0.45
TVP23AA6NH52 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.87■□□□□ 0.45
TVP23AA6NH52 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms