Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
IGKV3D-20A0A0C4DH25 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 DPP3P2-201ENST00000416030 1696 ntBASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 AC010141.2-201ENST00000452426 721 ntBASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 AL358852.1-201ENST00000623174 1268 ntBASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 AC098818.2-201ENST00000564925 2320 ntBASIC14.91□□□□□ -0.02
IGKV3D-20A0A0C4DH25 BX323043.1-201ENST00000641006 1765 ntBASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 SLC7A5P2-201ENST00000553010 536 ntBASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 AC110285.6-201ENST00000617652 491 ntBASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 MIR6084-201ENST00000622012 110 ntBASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 KRT8P36-201ENST00000489121 1440 ntBASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
IGKV3D-20A0A0C4DH25 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.89□□□□□ -0.03
IGKV3D-20A0A0C4DH25 TMEM179-206ENST00000616017 1645 ntBASIC14.88□□□□□ -0.03
IGKV3D-20A0A0C4DH25 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IGKV3D-20A0A0C4DH25 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGKV3D-20A0A0C4DH25 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGKV3D-20A0A0C4DH25 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
IGKV3D-20A0A0C4DH25 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.88□□□□□ -0.03
IGKV3D-20A0A0C4DH25 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IGKV3D-20A0A0C4DH25 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
IGKV3D-20A0A0C4DH25 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGKV3D-20A0A0C4DH25 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.88□□□□□ -0.03
IGKV3D-20A0A0C4DH25 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms