Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV21A0A0B4J279 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV21A0A0B4J279 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV21A0A0B4J279 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV21A0A0B4J279 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV21A0A0B4J279 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV21A0A0B4J279 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 AC097381.1-201ENST00000429019 1296 ntBASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 AC005837.3-201ENST00000612163 286 ntBASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 TMEM179-206ENST00000616017 1645 ntBASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV21A0A0B4J279 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV21A0A0B4J279 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV21A0A0B4J279 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms