Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV4A0A0B4J268 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TRAV4A0A0B4J268 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV4A0A0B4J268 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV4A0A0B4J268 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV4A0A0B4J268 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV4A0A0B4J268 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 AL356652.1-201ENST00000615962 565 ntBASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV4A0A0B4J268 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 CYP21A1P-202ENST00000354927 1481 ntBASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
TRAV4A0A0B4J268 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 AC006015.1-201ENST00000429970 570 ntBASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 BID-214ENST00000617586 542 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 AC100791.3-201ENST00000617619 330 ntBASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV4A0A0B4J268 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms