Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 MARK2P4-201ENST00000503381 2380 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 MIR25-201ENST00000384816 84 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC010880.1-202ENST00000427950 432 ntTSL 3 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AP001171.1-201ENST00000436373 864 ntTSL 2 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC083939.1-201ENST00000445475 126 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AP001318.1-201ENST00000476981 321 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC063943.2-201ENST00000495697 534 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 CASC16-201ENST00000510238 955 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 OR10J9P-201ENST00000511932 987 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC027801.3-201ENST00000515049 698 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 SCARNA20.1-201ENST00000516009 138 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC144568.2-201ENST00000522481 944 ntTSL 5 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AP001636.1-201ENST00000531997 1122 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 PCED1B-AS1-204ENST00000547851 780 ntTSL 3 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AL023284.4-201ENST00000564248 374 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 ADAM3B-201ENST00000569937 840 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC015802.4-201ENST00000589963 578 ntTSL 3 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 PSG10P-202ENST00000597171 1283 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 LINC00635-210ENST00000600240 714 ntTSL 5 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AP002856.2-202ENST00000606885 755 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AL136985.2-201ENST00000607372 535 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 MIR7113-201ENST00000621222 59 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 MAPK10-261ENST00000641050 3109 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 BMS1P1-201ENST00000374336 1332 ntBASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CROCCP3Q8IVE0 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 TRAF6P1-201ENST00000429404 1558 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 CDY7P-201ENST00000429883 1604 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 PPCS-204ENST00000372562 966 ntTSL 2 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AL590617.1-201ENST00000405630 748 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 SCG5-202ENST00000413748 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 BLNK-204ENST00000427367 1284 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 H3F3BP1-201ENST00000440551 403 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AC073188.1-201ENST00000442493 361 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AC010099.2-201ENST00000443177 373 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 DNAJC19P5-201ENST00000443295 316 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AC130689.1-201ENST00000451056 408 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AL390026.1-201ENST00000456647 457 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 RN7SL153P-201ENST00000486501 292 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 SNRPD2P1-201ENST00000489253 354 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AC226119.2-201ENST00000513501 530 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 LINC01411-206ENST00000515513 770 ntTSL 5 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 OR11J5P-201ENST00000556889 934 ntBASIC6.7□□□□□ -1.34
CROCCP3Q8IVE0 RN7SL473P-201ENST00000580341 299 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms