Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
UBE4BO95155 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
UBE4BO95155 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.21□□□□□ -1.1
UBE4BO95155 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
UBE4BO95155 RBMX2P2-201ENST00000257020 946 ntBASIC8.21□□□□□ -1.1
UBE4BO95155 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
UBE4BO95155 RN7SKP63-201ENST00000363187 301 ntBASIC8.21□□□□□ -1.1
UBE4BO95155 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
UBE4BO95155 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC8.21□□□□□ -1.1
UBE4BO95155 RN7SKP131-201ENST00000410698 301 ntBASIC8.21□□□□□ -1.1
UBE4BO95155 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
UBE4BO95155 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC8.21□□□□□ -1.1
UBE4BO95155 AC244505.2-201ENST00000435089 759 ntBASIC8.21□□□□□ -1.1
UBE4BO95155 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.21□□□□□ -1.1
UBE4BO95155 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.21□□□□□ -1.1
UBE4BO95155 RPL24P8-201ENST00000446071 474 ntBASIC8.21□□□□□ -1.1
UBE4BO95155 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.21□□□□□ -1.1
UBE4BO95155 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC8.21□□□□□ -1.1
UBE4BO95155 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC8.21□□□□□ -1.1
UBE4BO95155 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC8.21□□□□□ -1.1
UBE4BO95155 AC010327.2-201ENST00000587647 488 ntBASIC8.21□□□□□ -1.1
UBE4BO95155 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC8.21□□□□□ -1.1
UBE4BO95155 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
UBE4BO95155 AC002094.5-201ENST00000623773 629 ntBASIC8.21□□□□□ -1.1
UBE4BO95155 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
UBE4BO95155 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
UBE4BO95155 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
UBE4BO95155 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
UBE4BO95155 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
UBE4BO95155 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.21□□□□□ -1.1
UBE4BO95155 VEZF1P1-201ENST00000423931 1541 ntBASIC8.21□□□□□ -1.1
UBE4BO95155 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
UBE4BO95155 AL035555.1-201ENST00000404462 1790 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC8.2□□□□□ -1.1
UBE4BO95155 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
UBE4BO95155 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.2□□□□□ -1.1
UBE4BO95155 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
UBE4BO95155 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
UBE4BO95155 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.2□□□□□ -1.1
UBE4BO95155 MAPK10-333ENST00000641607 2481 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
UBE4BO95155 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.2□□□□□ -1.1
UBE4BO95155 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
UBE4BO95155 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
UBE4BO95155 RN7SKP211-201ENST00000363328 315 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 RN7SKP174-201ENST00000363803 330 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 COQ3-202ENST00000369240 646 ntTSL 5 BASIC8.2□□□□□ -1.1
UBE4BO95155 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
UBE4BO95155 RPL7-203ENST00000396466 762 ntTSL 3 BASIC8.2□□□□□ -1.1
UBE4BO95155 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC8.2□□□□□ -1.1
UBE4BO95155 MED15P9-201ENST00000424716 533 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.2□□□□□ -1.1
UBE4BO95155 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC8.2□□□□□ -1.1
UBE4BO95155 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.2□□□□□ -1.1
UBE4BO95155 AC114928.1-201ENST00000446516 415 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.2□□□□□ -1.1
UBE4BO95155 PYM1-204ENST00000454792 884 ntTSL 2 BASIC8.2□□□□□ -1.1
UBE4BO95155 RPS14P7-201ENST00000473701 448 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC8.2□□□□□ -1.1
UBE4BO95155 OR6M3P-201ENST00000531567 700 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 AC133569.1-201ENST00000564327 373 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC8.2□□□□□ -1.1
UBE4BO95155 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC8.2□□□□□ -1.1
UBE4BO95155 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC8.2□□□□□ -1.1
UBE4BO95155 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC8.2□□□□□ -1.1
UBE4BO95155 AL390058.1-201ENST00000603834 629 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 CR382285.1-202ENST00000604687 547 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 AL136985.2-201ENST00000607372 535 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 MIR7162-201ENST00000611134 69 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 AC135050.6-202ENST00000613584 392 ntBASIC8.2□□□□□ -1.1
UBE4BO95155 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC8.2□□□□□ -1.1
UBE4BO95155 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
UBE4BO95155 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
UBE4BO95155 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
UBE4BO95155 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
UBE4BO95155 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
UBE4BO95155 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
UBE4BO95155 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
UBE4BO95155 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 AP003471.1-202ENST00000319051 1988 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.19□□□□□ -1.1
UBE4BO95155 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 FGG-204ENST00000405164 1539 ntTSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC8.19□□□□□ -1.1
UBE4BO95155 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 AL078621.1-201ENST00000272567 768 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 RN7SKP36-201ENST00000363997 312 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 FTH1P26-201ENST00000406512 701 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 GAPDHP73-201ENST00000423411 1007 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms