Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 RNA5SP389-201ENST00000362610 115 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 RNA5SP226-201ENST00000362653 115 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 RNA5SP161-201ENST00000363871 115 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 RNA5SP149-201ENST00000364952 92 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 RIT1-201ENST00000368322 855 ntTSL 3 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC068137.1-201ENST00000429272 584 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 HMGN2P24-201ENST00000433516 273 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AL161454.1-201ENST00000446226 569 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 DBIL5P-202ENST00000453414 250 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 RN7SL89P-201ENST00000480252 283 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC024451.1-201ENST00000508013 779 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC006557.4-201ENST00000585516 830 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 LINC00674-202ENST00000590734 160 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC020910.4-201ENST00000612269 540 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC010538.1-201ENST00000615131 663 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC025162.2-201ENST00000619602 560 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC002094.5-201ENST00000623773 629 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC005355.2-201ENST00000625064 484 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AL034408.1-201ENST00000637712 664 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 NF1P7-201ENST00000612076 1530 ntBASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LINC00346Q8IVM7 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 AF131215.2-201ENST00000531549 1710 ntBASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 AC090643.1-201ENST00000623600 3100 ntBASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 LST1-211ENST00000376110 433 ntTSL 3 BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 MIR555-201ENST00000384987 96 ntBASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 RBM22P7-201ENST00000421321 280 ntBASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 AL137074.1-201ENST00000442640 465 ntBASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 MTND4LP12-201ENST00000448237 295 ntBASIC6.74□□□□□ -1.33
LINC00346Q8IVM7 AL135929.1-201ENST00000449287 552 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms