Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AL353626.3-201ENST00000413399 657 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 BPI-202ENST00000417318 1082 ntTSL 5 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 IMP3P1-201ENST00000427532 557 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 LINC00297-201ENST00000453470 913 ntTSL 2 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 RN7SL745P-201ENST00000484900 299 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 RN7SL135P-201ENST00000490144 278 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 FAXDC2-206ENST00000518651 536 ntTSL 4 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 AC044839.4-201ENST00000534128 469 ntTSL 3 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 FDPSP3-201ENST00000556903 1013 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 RN7SL716P-201ENST00000580539 268 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 AC060766.7-201ENST00000587012 1212 ntTSL 3 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 AC011894.1-201ENST00000603255 456 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 AC087623.4-201ENST00000606593 695 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 AL352984.2-202ENST00000613699 155 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 uc_338.24-201ENST00000617802 182 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 AL354718.2-201ENST00000618030 371 ntTSL 2 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 AC079316.2-201ENST00000623545 1375 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 FLT1-206ENST00000615611 1476 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 PSMC1P12-201ENST00000436509 1314 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 AC008514.2-201ENST00000522096 1337 ntBASIC6.76□□□□□ -1.33
CROCCP3Q8IVE0 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 TAS2R5-201ENST00000247883 1151 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 CLEC12B-201ENST00000338896 1097 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 IGKV1D-12-201ENST00000377032 371 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AL080285.1-201ENST00000404225 984 ntBASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AC103563.8-201ENST00000415716 318 ntBASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 RPL21P88-201ENST00000436649 436 ntBASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AL157714.1-201ENST00000448964 625 ntBASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 LINC02543-201ENST00000451285 845 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 RPL12P40-201ENST00000467028 488 ntBASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AC073651.1-201ENST00000544015 465 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 DNM1P33-201ENST00000565222 270 ntBASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AC135048.2-201ENST00000572471 561 ntTSL 4 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AL138960.1-201ENST00000613838 513 ntBASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 AP000769.1-201ENST00000619960 844 ntTSL 2 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 BCL9P1-201ENST00000506012 2561 ntBASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CROCCP3Q8IVE0 USP9YP3-201ENST00000434481 1766 ntBASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CROCCP3Q8IVE0 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms