Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.39□□□□□ -1.39
AP3S2P59780 AC098617.1-202ENST00000428980 1207 ntTSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 AC073475.1-201ENST00000434012 592 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 RBMY2NP-201ENST00000434454 1028 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 AC024082.1-201ENST00000435250 699 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 AC087499.3-202ENST00000441215 1173 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 AL772284.1-201ENST00000443421 905 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 OR7H1P-201ENST00000448965 922 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 MARK2P14-201ENST00000449657 628 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 MED28P8-201ENST00000454831 521 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 RN7SL7P-201ENST00000467823 298 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 AC066616.1-201ENST00000486795 413 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 AC116353.1-201ENST00000489727 316 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 RPL5P11-201ENST00000498068 893 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.39□□□□□ -1.39
AP3S2P59780 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.39□□□□□ -1.39
AP3S2P59780 C14orf159-210ENST00000518665 959 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 PTK2-241ENST00000522950 548 ntTSL 4 BASIC6.39□□□□□ -1.39
AP3S2P59780 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 AL352979.1-201ENST00000554238 297 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.39□□□□□ -1.39
AP3S2P59780 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC6.39□□□□□ -1.39
AP3S2P59780 JPT1-211ENST00000581874 517 ntTSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 AP005131.4-202ENST00000590468 570 ntTSL 4 BASIC6.39□□□□□ -1.39
AP3S2P59780 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC6.39□□□□□ -1.39
AP3S2P59780 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 AC009955.2-201ENST00000597288 542 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 AC063950.1-202ENST00000600133 568 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 AC005518.2-201ENST00000603254 282 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 AC084876.1-201ENST00000612793 641 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
AP3S2P59780 FAM74A4-202ENST00000618177 469 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 AC079602.4-201ENST00000637836 532 ntBASIC6.39□□□□□ -1.39
AP3S2P59780 AL627309.5-203ENST00000466557 1301 ntTSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.39□□□□□ -1.39
AP3S2P59780 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC6.39□□□□□ -1.39
AP3S2P59780 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
AP3S2P59780 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AP3S2P59780 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.38□□□□□ -1.39
AP3S2P59780 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
AP3S2P59780 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.38□□□□□ -1.39
AP3S2P59780 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.38□□□□□ -1.39
AP3S2P59780 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
AP3S2P59780 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.38□□□□□ -1.39
AP3S2P59780 RIT1-201ENST00000368322 855 ntTSL 3 BASIC6.38□□□□□ -1.39
AP3S2P59780 HSPB11-203ENST00000371377 760 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
AP3S2P59780 TRBV3-1-201ENST00000390387 391 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
AP3S2P59780 CNN3P1-201ENST00000401596 935 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 AC017035.1-201ENST00000411999 1115 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC6.38□□□□□ -1.39
AP3S2P59780 AC004920.1-201ENST00000422831 482 ntTSL 3 BASIC6.38□□□□□ -1.39
AP3S2P59780 AC010880.1-202ENST00000427950 432 ntTSL 3 BASIC6.38□□□□□ -1.39
AP3S2P59780 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC6.38□□□□□ -1.39
AP3S2P59780 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC6.38□□□□□ -1.39
AP3S2P59780 AL450023.2-201ENST00000453276 545 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 MYB-AS1-201ENST00000455534 449 ntTSL 2 BASIC6.38□□□□□ -1.39
AP3S2P59780 NUTF2P4-201ENST00000458353 381 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 AC026336.1-201ENST00000466577 351 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 AC110994.1-201ENST00000468519 406 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 RN7SL448P-201ENST00000475566 295 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 RN7SL241P-201ENST00000482973 236 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 RPL17P37-201ENST00000490729 548 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 GCSHP1-201ENST00000512554 484 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 IL18-202ENST00000524595 1090 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.38□□□□□ -1.39
AP3S2P59780 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC6.38□□□□□ -1.39
AP3S2P59780 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC6.38□□□□□ -1.39
AP3S2P59780 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
AP3S2P59780 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
AP3S2P59780 AURKC-206ENST00000598785 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 TRMT112P7-201ENST00000603133 367 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 CENPP-204ENST00000618653 570 ntTSL 2 BASIC6.38□□□□□ -1.39
AP3S2P59780 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 LYG2-206ENST00000626374 650 ntTSL 5 BASIC6.38□□□□□ -1.39
AP3S2P59780 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms