Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AC020549.1-201ENST00000536916 1440 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 U3.48-201ENST00000363172 216 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 OR4F7P-201ENST00000402444 931 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 OR4F1P-201ENST00000405102 938 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AL671986.1-201ENST00000422197 955 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 OR4F2P-201ENST00000424047 938 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 NAP1L4P3-201ENST00000432820 1147 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 RPL4P2-201ENST00000447259 1282 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 UBE2V1P12-201ENST00000503954 474 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 OR4C7P-201ENST00000533375 919 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 RPL23AP77-201ENST00000588044 463 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AL158151.4-201ENST00000600965 507 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 RPL23AP90-201ENST00000603820 236 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AC004839.1-201ENST00000610269 501 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AC097478.2-201ENST00000610572 514 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 MIR6745-201ENST00000612694 127 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AL353608.4-201ENST00000624487 1188 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 TDGF1P3-202ENST00000602699 2710 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 ZNF300P1-201ENST00000356555 1822 ntBASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 CREM-218ENST00000460270 1416 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 RN7SKP77-201ENST00000363261 353 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 MSRB1P1-201ENST00000396851 354 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 RBMS1P1-201ENST00000417216 1156 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 MTND4LP7-201ENST00000431728 294 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 EFCAB14P1-201ENST00000442409 463 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 ARL2BPP7-201ENST00000446421 490 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 ATP5G1P3-201ENST00000463301 410 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AC098862.1-201ENST00000504991 413 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AF186996.3-201ENST00000509527 964 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 OR4A11P-201ENST00000529557 906 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 LINC02544-201ENST00000564830 544 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms