Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 AC087045.3-201ENST00000623046 2468 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
UBE3AQ05086 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC8.17□□□□□ -1.1
UBE3AQ05086 RNA5SP23-201ENST00000391006 105 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AC024937.2-201ENST00000411669 1242 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC8.17□□□□□ -1.1
UBE3AQ05086 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC8.17□□□□□ -1.1
UBE3AQ05086 CT45A11P-201ENST00000448043 1134 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AL354872.1-201ENST00000456361 967 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AC018892.2-201ENST00000457656 693 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AL445187.1-201ENST00000502685 260 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AP001636.1-201ENST00000531997 1122 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC8.17□□□□□ -1.1
UBE3AQ05086 AC013652.1-206ENST00000558277 789 ntTSL 2 BASIC8.17□□□□□ -1.1
UBE3AQ05086 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC8.17□□□□□ -1.1
UBE3AQ05086 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 MIR378H-201ENST00000579966 83 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AL390058.1-201ENST00000603834 629 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AC108451.2-201ENST00000603875 538 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AL022238.3-201ENST00000609279 443 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AC007671.1-201ENST00000616957 830 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AC073488.7-201ENST00000633785 778 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC8.17□□□□□ -1.1
UBE3AQ05086 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.17□□□□□ -1.1
UBE3AQ05086 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.17□□□□□ -1.1
UBE3AQ05086 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.17□□□□□ -1.1
UBE3AQ05086 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.17□□□□□ -1.1
UBE3AQ05086 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 USP9YP3-201ENST00000434481 1766 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
UBE3AQ05086 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC8.17□□□□□ -1.1
UBE3AQ05086 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 ZNF969P-201ENST00000510345 2341 ntBASIC8.17□□□□□ -1.1
UBE3AQ05086 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
UBE3AQ05086 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE3AQ05086 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.16□□□□□ -1.1
UBE3AQ05086 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
UBE3AQ05086 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC8.16□□□□□ -1.1
UBE3AQ05086 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
UBE3AQ05086 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 U3.48-201ENST00000363172 216 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 BCRP8-201ENST00000412037 255 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 SETP22-201ENST00000412243 957 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 LINC01066-201ENST00000415283 399 ntTSL 3 BASIC8.16□□□□□ -1.1
UBE3AQ05086 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.16□□□□□ -1.1
UBE3AQ05086 AC231533.2-201ENST00000419045 978 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC8.16□□□□□ -1.1
UBE3AQ05086 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC8.16□□□□□ -1.1
UBE3AQ05086 LIN28AP2-201ENST00000445283 458 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
UBE3AQ05086 AL133480.2-201ENST00000456723 487 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 WBP1LP1-201ENST00000460451 896 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 TUBBP11-201ENST00000472255 252 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 AL079303.1-201ENST00000486611 463 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 AC068631.3-201ENST00000538831 225 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE3AQ05086 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.16□□□□□ -1.1
UBE3AQ05086 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC8.16□□□□□ -1.1
UBE3AQ05086 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
UBE3AQ05086 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE3AQ05086 AC004852.1-201ENST00000605206 154 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 AC009283.1-201ENST00000615852 645 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC8.16□□□□□ -1.1
UBE3AQ05086 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE3AQ05086 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
UBE3AQ05086 MAPK10-333ENST00000641607 2481 ntBASIC8.16□□□□□ -1.1
UBE3AQ05086 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE3AQ05086 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.16□□□□□ -1.1
UBE3AQ05086 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE3AQ05086 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
UBE3AQ05086 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
UBE3AQ05086 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
UBE3AQ05086 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
UBE3AQ05086 RPL12P38-202ENST00000588627 2319 ntBASIC8.15□□□□□ -1.1
UBE3AQ05086 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms