Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
UBE4BO95155 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 AL590065.1-201ENST00000603371 4774 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.29□□□□□ -1.08
UBE4BO95155 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.29□□□□□ -1.08
UBE4BO95155 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC8.29□□□□□ -1.08
UBE4BO95155 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
UBE4BO95155 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
UBE4BO95155 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
UBE4BO95155 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.29□□□□□ -1.08
UBE4BO95155 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
UBE4BO95155 AC126773.4-201ENST00000612545 3043 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 RNU1-16P-201ENST00000365477 164 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 SNORA68-201ENST00000384437 133 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 HNRNPCP2-201ENST00000399515 881 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 AC023141.10-201ENST00000415634 200 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE4BO95155 AL357632.1-201ENST00000426688 643 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE4BO95155 RN7SL549P-201ENST00000478997 282 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC8.29□□□□□ -1.08
UBE4BO95155 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE4BO95155 OR7E96P-201ENST00000530816 976 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE4BO95155 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE4BO95155 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC8.29□□□□□ -1.08
UBE4BO95155 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
UBE4BO95155 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC8.29□□□□□ -1.08
UBE4BO95155 RN7SL25P-201ENST00000583862 260 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 AC004852.1-201ENST00000605206 154 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC8.29□□□□□ -1.08
UBE4BO95155 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
UBE4BO95155 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
UBE4BO95155 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.28□□□□□ -1.08
UBE4BO95155 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
UBE4BO95155 AC090983.1-201ENST00000623426 3897 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC8.28□□□□□ -1.08
UBE4BO95155 RNA5SP483-201ENST00000363431 118 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC8.28□□□□□ -1.08
UBE4BO95155 SSX6-201ENST00000376932 562 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 LARP1P1-201ENST00000407692 292 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 OR7E36P-201ENST00000419933 954 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.28□□□□□ -1.08
UBE4BO95155 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC8.28□□□□□ -1.08
UBE4BO95155 SNX18P3-201ENST00000424993 835 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC8.28□□□□□ -1.08
UBE4BO95155 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC8.28□□□□□ -1.08
UBE4BO95155 AC234771.3-201ENST00000454984 622 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 RN7SL870P-201ENST00000460111 296 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC8.28□□□□□ -1.08
UBE4BO95155 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.28□□□□□ -1.08
UBE4BO95155 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.28□□□□□ -1.08
UBE4BO95155 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
UBE4BO95155 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 AC138749.2-201ENST00000566048 167 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms