Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC00294-201ENST00000631190 3306 ntBASIC8.13□□□□□ -1.11
MTHFRP42898 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
MTHFRP42898 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
MTHFRP42898 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
MTHFRP42898 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
MTHFRP42898 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
MTHFRP42898 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
MTHFRP42898 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
MTHFRP42898 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
MTHFRP42898 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.13□□□□□ -1.11
MTHFRP42898 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
MTHFRP42898 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
MTHFRP42898 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
MTHFRP42898 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 SETP22-201ENST00000412243 957 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 PPIAP23-201ENST00000420099 497 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 GAPDHP73-201ENST00000423411 1007 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 AC099344.1-201ENST00000433548 492 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
MTHFRP42898 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC8.12□□□□□ -1.11
MTHFRP42898 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.12□□□□□ -1.11
MTHFRP42898 AL079303.1-201ENST00000486611 463 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 AK6-203ENST00000502819 743 ntTSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.12□□□□□ -1.11
MTHFRP42898 RNA5SP101-201ENST00000517036 108 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC8.12□□□□□ -1.11
MTHFRP42898 OR7E87P-201ENST00000532397 929 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 SIGLEC31P-201ENST00000594237 551 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 OR5AH1P-201ENST00000595968 283 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 AC140658.6-201ENST00000603958 201 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 AC103724.4-201ENST00000605981 292 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 MIR6070-201ENST00000613967 103 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC8.12□□□□□ -1.11
MTHFRP42898 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 AC093909.6-201ENST00000624757 775 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
MTHFRP42898 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 VEZF1P1-201ENST00000423931 1541 ntBASIC8.12□□□□□ -1.11
MTHFRP42898 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
MTHFRP42898 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.12□□□□□ -1.11
MTHFRP42898 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.12□□□□□ -1.11
MTHFRP42898 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC8.12□□□□□ -1.11
MTHFRP42898 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
MTHFRP42898 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.11□□□□□ -1.11
MTHFRP42898 AL137918.1-201ENST00000624542 1922 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
MTHFRP42898 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.11□□□□□ -1.11
MTHFRP42898 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 MARK2P4-201ENST00000503381 2380 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.11□□□□□ -1.11
MTHFRP42898 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 AC110998.1-201ENST00000519029 2053 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 RPL12P38-202ENST00000588627 2319 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.11□□□□□ -1.11
MTHFRP42898 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 AC113608.1-201ENST00000398740 305 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 VDAC1P8-201ENST00000406025 853 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 MRPL32P1-201ENST00000406301 247 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 OR52N3P-201ENST00000413417 934 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 PGAM1P3-201ENST00000420790 565 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 EIF4A1P10-201ENST00000428832 1216 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 AL592114.2-201ENST00000440142 532 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC8.11□□□□□ -1.11
MTHFRP42898 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC8.11□□□□□ -1.11
MTHFRP42898 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.11□□□□□ -1.11
MTHFRP42898 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC8.11□□□□□ -1.11
MTHFRP42898 TUBBP11-201ENST00000472255 252 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 RN7SL861P-201ENST00000473793 285 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms