Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AL137918.1-201ENST00000624542 1922 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 XRCC6P3-201ENST00000422187 1621 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AL390039.1-201ENST00000399148 611 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC003080.1-201ENST00000413552 767 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 FAM204CP-201ENST00000424489 642 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 RPS6P14-201ENST00000425165 719 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 CICP10-201ENST00000439497 198 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 BTBD7P2-201ENST00000441962 620 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC118653.1-201ENST00000442627 561 ntTSL 3 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC002366.1-201ENST00000446186 1190 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 ARL2BPP7-201ENST00000446421 490 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 ELOBP1-201ENST00000447693 357 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 GAPDHP16-201ENST00000448152 962 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 MARK2P14-201ENST00000449657 628 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 RPL7P21-201ENST00000478287 635 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 MYADML-203ENST00000491596 951 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 ENPP7P10-201ENST00000504828 933 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 RN7SKP2-201ENST00000517003 319 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 NACAP1-202ENST00000519039 641 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 MTND6P20-201ENST00000522986 418 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 ANAPC15-213ENST00000543050 807 ntTSL 3 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC048344.2-201ENST00000547280 147 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 EIF4A1P4-201ENST00000550578 1213 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 DPPA3P2-201ENST00000553589 478 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 SNRPGP1-201ENST00000553864 222 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AL023583.1-201ENST00000607518 1143 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 MIR6751-201ENST00000610479 63 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 SERPINC1-204ENST00000617423 984 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 RN7SL301P-202ENST00000618767 298 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AL109806.1-201ENST00000623967 1248 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AP001002.2-201ENST00000625137 386 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 NR1H5P-201ENST00000452683 1377 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 ZNF887P-201ENST00000431363 1407 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AL133279.3-201ENST00000563140 2352 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AL031651.1-201ENST00000615357 1438 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNX18Q96RF0 CASC19-243ENST00000641588 1546 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.16□□□□□ -1.26
SNX18Q96RF0 AP001442.1-206ENST00000600590 1573 ntTSL 5 BASIC7.16□□□□□ -1.26
SNX18Q96RF0 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SNX18Q96RF0 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SNX18Q96RF0 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.16□□□□□ -1.26
SNX18Q96RF0 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SNX18Q96RF0 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SNX18Q96RF0 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
SNX18Q96RF0 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SNX18Q96RF0 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
SNX18Q96RF0 MAPK10-319ENST00000641459 2542 ntBASIC7.16□□□□□ -1.26
SNX18Q96RF0 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SNX18Q96RF0 OR11G2-201ENST00000357366 1038 ntBASIC7.16□□□□□ -1.26
SNX18Q96RF0 FHL1-203ENST00000370676 833 ntTSL 5 BASIC7.16□□□□□ -1.26
SNX18Q96RF0 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SNX18Q96RF0 AL034372.1-201ENST00000407586 754 ntBASIC7.16□□□□□ -1.26
SNX18Q96RF0 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.16□□□□□ -1.26
SNX18Q96RF0 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC7.16□□□□□ -1.26
SNX18Q96RF0 RBMS1P1-201ENST00000417216 1156 ntBASIC7.16□□□□□ -1.26
SNX18Q96RF0 AC111200.2-201ENST00000418877 505 ntBASIC7.16□□□□□ -1.26
SNX18Q96RF0 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC7.16□□□□□ -1.26
SNX18Q96RF0 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms