Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G3Q9Y6M4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 AC026310.3-201ENST00000625186 2373 ntBASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1G3Q9Y6M4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
CSNK1G3Q9Y6M4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 REXO1L12P-201ENST00000622156 912 ntBASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G3Q9Y6M4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 Z98882.1-201ENST00000622160 2253 ntBASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G3Q9Y6M4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms