Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 CD99P1-205ENST00000527459 561 ntBASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 AC060766.5-201ENST00000590539 871 ntBASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGC4Q9Y5F7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 PNMA6B-201ENST00000538162 1200 ntBASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC4Q9Y5F7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 AL391422.3-201ENST00000603791 2761 ntBASIC20.29■□□□□ 0.84
PCDHGC4Q9Y5F7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGC4Q9Y5F7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC4Q9Y5F7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms