Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 MIR4497-201ENST00000583208 89 ntBASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CTDP1Q9Y5B0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 SNORA78-201ENST00000459373 127 ntBASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 AC133681.1-201ENST00000465482 601 ntBASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CTDP1Q9Y5B0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.27■■□□□ 1.31
CTDP1Q9Y5B0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.26■■□□□ 1.31
CTDP1Q9Y5B0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 AP001412.1-201ENST00000608405 714 ntBASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 FEM1AP4-201ENST00000443167 1987 ntBASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.25■■□□□ 1.31
CTDP1Q9Y5B0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 HLA-G-202ENST00000376815 851 ntBASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 HLA-G-203ENST00000376818 1127 ntBASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CTDP1Q9Y5B0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms