Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PKP3Q9Y446 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PKP3Q9Y446 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PKP3Q9Y446 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PKP3Q9Y446 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PKP3Q9Y446 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PKP3Q9Y446 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PKP3Q9Y446 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.19■□□□□ 0.82
PKP3Q9Y446 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PKP3Q9Y446 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.19■□□□□ 0.82
PKP3Q9Y446 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
PKP3Q9Y446 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PKP3Q9Y446 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PKP3Q9Y446 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PKP3Q9Y446 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PKP3Q9Y446 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PKP3Q9Y446 HLA-L-209ENST00000420110 1011 ntBASIC20.18■□□□□ 0.82
PKP3Q9Y446 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PKP3Q9Y446 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PKP3Q9Y446 AIRN-201ENST00000601203 4374 ntBASIC20.18■□□□□ 0.82
PKP3Q9Y446 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PKP3Q9Y446 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.18■□□□□ 0.82
PKP3Q9Y446 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PKP3Q9Y446 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PKP3Q9Y446 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PKP3Q9Y446 SMG8-203ENST00000578922 2178 ntBASIC20.17■□□□□ 0.82
PKP3Q9Y446 AC073130.3-201ENST00000624389 2278 ntBASIC20.17■□□□□ 0.82
PKP3Q9Y446 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PKP3Q9Y446 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.17■□□□□ 0.82
PKP3Q9Y446 ID1-201ENST00000376105 1233 ntBASIC20.17■□□□□ 0.82
PKP3Q9Y446 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.17■□□□□ 0.82
PKP3Q9Y446 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.17■□□□□ 0.82
PKP3Q9Y446 DUSP5P2-201ENST00000426873 1033 ntBASIC20.17■□□□□ 0.82
PKP3Q9Y446 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.17■□□□□ 0.82
PKP3Q9Y446 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.17■□□□□ 0.82
PKP3Q9Y446 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PKP3Q9Y446 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PKP3Q9Y446 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PKP3Q9Y446 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PKP3Q9Y446 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PKP3Q9Y446 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PKP3Q9Y446 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.17■□□□□ 0.82
PKP3Q9Y446 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PKP3Q9Y446 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.17■□□□□ 0.82
PKP3Q9Y446 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PKP3Q9Y446 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PKP3Q9Y446 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PKP3Q9Y446 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PKP3Q9Y446 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PKP3Q9Y446 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PKP3Q9Y446 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PKP3Q9Y446 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.16■□□□□ 0.82
PKP3Q9Y446 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PKP3Q9Y446 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PKP3Q9Y446 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PKP3Q9Y446 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PKP3Q9Y446 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
PKP3Q9Y446 AL512408.1-201ENST00000569378 2000 ntBASIC20.15■□□□□ 0.82
PKP3Q9Y446 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PKP3Q9Y446 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PKP3Q9Y446 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.15■□□□□ 0.82
PKP3Q9Y446 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PKP3Q9Y446 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.15■□□□□ 0.82
PKP3Q9Y446 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PKP3Q9Y446 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PKP3Q9Y446 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PKP3Q9Y446 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.15■□□□□ 0.82
PKP3Q9Y446 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms